ENSG00000277149


Homo sapiens

Features
Gene ID: ENSG00000277149
  
Biological name :TYW1B
  
Synonyms : tRNA-yW synthesizing protein 1 homolog B / TYW1B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q11.23
Gene start: 72558744
Gene end: 72828198
  
Corresponding Affymetrix probe sets: 218347_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000480534
Ensembl peptide - ENSP00000484480
Ensembl peptide - ENSP00000482502
NCBI entrez gene - 441250     See in Manteia.
RefSeq - XM_011516230
RefSeq - XM_017012221
RefSeq - XM_011516232
RefSeq - NM_001145440
RefSeq - XM_011516231
RefSeq Peptide - NP_001138912
swissprot - A0A087X1V1
swissprot - A0A087WWV6
swissprot - A0A087WZB2
Ensembl - ENSG00000277149
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tyw1ENSDARG00000062987Danio rerio
 ENSGALG00000001110Gallus gallus
 Tyw1ENSMUSG00000056310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TYW1 / Q9NV66 / tRNA-yW synthesizing protein 1 homologENSG0000019887495


Protein motifs (from Interpro)
Interpro ID Name
 IPR001094  Flavodoxin-like
 IPR007197  Radical SAM
 IPR008254  Flavodoxin/nitric oxide synthase
 IPR013785  Aldolase-type TIM barrel
 IPR013917  tRNA wybutosine-synthesis
 IPR029039  Flavoprotein-like superfamily
 IPR034556  S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0010181 FMN binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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