ENSGALG00000001110


Gallus gallus

Features
Gene ID: ENSGALG00000001110
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q8BJM7 / Q9NV66 / tRNA-yW synthesizing protein 1 homolog / tRNA-yW synthesizing protein 1 homolog B / tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) / TYW1 / TYW1B
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 813728
Gene end: 893422
  
Corresponding Affymetrix probe sets: GgaAffx.736.1.S1_at (Chicken Array)   GgaAffx.736.2.S1_s_at (Chicken Array)   GgaAffx.736.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001664
NCBI entrez gene - 417478     See in Manteia.
RefSeq - XM_015295937
RefSeq - XM_015295938
swissprot - F1NVK4
Ensembl - ENSGALG00000001110
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tyw1ENSDARG00000062987Danio rerio
 TYW1ENSG00000198874Homo sapiens
 TYW1BENSG00000277149Homo sapiens
 Tyw1ENSMUSG00000056310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001094  Flavodoxin-like
 IPR007197  Radical SAM
 IPR008254  Flavodoxin/nitric oxide synthase
 IPR013785  Aldolase-type TIM barrel
 IPR013917  tRNA wybutosine-synthesis
 IPR029039  Flavoprotein-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0010181 FMN binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr