ENSGALG00000001101


Gallus gallus

Features
Gene ID: ENSGALG00000001101
  
Biological name :MBD3
  
Synonyms : MBD3
  
Possible biological names infered from orthology : A0A1B0GVZ6 / A6NDZ8 / A6NE82 / A6NJ08 / MBD3L1 / MBD3L2 / MBD3L2B / MBD3L3 / MBD3L4 / MBD3L5 / methyl-CpG binding domain protein 3 like 1 / methyl-CpG binding domain protein 3 like 2 / methyl-CpG binding domain protein 3 like 2B / methyl-CpG binding domain protein 3 like 3 / methyl-CpG binding domain protein 3 like 4 / methyl-CpG binding domain protein 3 like 5 / Q8NHZ7 / Q8WWY6 / Q9D9H3
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 2453802
Gene end: 2470213
  
Corresponding Affymetrix probe sets: GgaAffx.11709.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050254
Ensembl peptide - ENSGALP00000053741
Ensembl peptide - ENSGALP00000040377
NCBI entrez gene - 770153     See in Manteia.
RefSeq - XM_015299948
RefSeq - NM_001079751
RefSeq - XM_015299946
RefSeq - XM_015299947
RefSeq Peptide - NP_001073219
swissprot - Q5ZLX8
swissprot - A0A1D5PLM3
swissprot - A0A1D5PBX2
Ensembl - ENSGALG00000001101
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mbd3aENSDARG00000061774Danio rerio
 A6NDZ8ENSG00000205718Homo sapiens
 A6NE82ENSG00000182315Homo sapiens
 A6NJ08ENSG00000237247Homo sapiens
 MBD3L1ENSG00000170948Homo sapiens
 MBD3L2ENSG00000230522Homo sapiens
 MBD3L2BENSG00000196589Homo sapiens
 Mbd3l1ENSMUSG00000038691Mus musculus
 Mbd3l2ENSMUSG00000047508Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001739  Methyl-CpG DNA binding
 IPR016177  DNA-binding domain superfamily
 IPR025884  Methyl-CpG binding protein 2/3, C-terminal domain
 IPR032343  Methyl-CpG-binding domain protein 2/3, p55-binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006346 methylation-dependent chromatin silencing IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016581 NuRD complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008327 methyl-CpG binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr