ENSMUSG00000038691


Mus musculus

Features
Gene ID: ENSMUSG00000038691
  
Biological name :Mbd3l1
  
Synonyms : Mbd3l1 / methyl-CpG binding domain protein 3-like 1 / Q9D9H3
  
Possible biological names infered from orthology : Q8WWY6
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A2
Gene start: 18478359
Gene end: 18485298
  
Corresponding Affymetrix probe sets: 10583371 (MoGene1.0st)   1426308_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000063957
Ensembl peptide - ENSMUSP00000149425
Ensembl peptide - ENSMUSP00000149619
NCBI entrez gene - 73503     See in Manteia.
MGI - MGI:1920753
RefSeq - XM_006510640
RefSeq - NM_001357418
RefSeq - NM_028557
RefSeq - XM_006510639
RefSeq Peptide - NP_082833
RefSeq Peptide - NP_001344347
RefSeq Peptide - NP_001344348
swissprot - Q0P5Y0
swissprot - Q9D9H3
Ensembl - ENSMUSG00000038691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mbd3aENSDARG00000061774Danio rerio
 MBD3ENSGALG00000001101Gallus gallus
 MBD3L1ENSG00000170948Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mbd3 / Q9Z2D8 / Methyl-CpG-binding domain protein 3 / O95983*ENSMUSG0000003547834
Mbd2 / Q9Z2E1 / Methyl-CpG-binding domain protein 2 / Q9UBB5*ENSMUSG0000002451331
Mbd3l2 / A6NE82* / A6NJ08* / Q8NHZ7* / A6NDZ8* / MBD3L3* / MBD3L4* / MBD3L5* / MBD3L2B* / A0A1B0GVZ6* / methyl-CpG binding domain protein 3 like 3* / methyl-CpG binding domain protein 3 lik...ENSMUSG0000004750828


Protein motifs (from Interpro)
Interpro ID Name
 IPR025884  Methyl-CpG binding protein 2/3, C-terminal domain
 IPR032343  Methyl-CpG-binding domain protein 2/3, p55-binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006346 methylation-dependent chromatin silencing IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0008327 methyl-CpG binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Bmpr2tm1Kmi/Bmpr2+,Btg2tm1Spo/Btg2tm1Spo
Genetic Background: involves: 129S4/SvJae * C57BL/6

Allelic Composition: Mbd3l1tm1Gpp/Mbd3l1tm1Gpp,Mbd3l2tm1Gpp/Mbd3l2tm1Gpp
Genetic Background: involves: 129S1/Sv

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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