ENSMUSG00000047508


Mus musculus

Features
Gene ID: ENSMUSG00000047508
  
Biological name :Mbd3l2
  
Synonyms : Mbd3l2
  
Possible biological names infered from orthology : A0A1B0GVZ6 / A6NDZ8 / A6NE82 / A6NJ08 / MBD3L2B / MBD3L3 / MBD3L4 / MBD3L5 / methyl-CpG binding domain protein 3 like 2 / methyl-CpG binding domain protein 3 like 2B / methyl-CpG binding domain protein 3 like 3 / methyl-CpG binding domain protein 3 like 4 / methyl-CpG binding domain protein 3 like 5 / Q8NHZ7
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A2
Gene start: 18430654
Gene end: 18446316
  
Corresponding Affymetrix probe sets: 10583365 (MoGene1.0st)   1452644_at (Mouse Genome 430 2.0 Array)   1459988_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054515
Ensembl peptide - ENSMUSP00000149130
NCBI entrez gene - 234988     See in Manteia.
MGI - MGI:2158460
RefSeq - NM_144934
RefSeq Peptide - NP_659183
swissprot - Q3UXB0
Ensembl - ENSMUSG00000047508
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mbd3aENSDARG00000061774Danio rerio
 MBD3ENSGALG00000001101Gallus gallus
 A6NDZ8ENSG00000205718Homo sapiens
 A6NE82ENSG00000182315Homo sapiens
 A6NJ08ENSG00000237247Homo sapiens
 MBD3L2ENSG00000230522Homo sapiens
 MBD3L2BENSG00000196589Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mbd3 / Q9Z2D8 / Methyl-CpG-binding domain protein 3 / O95983*ENSMUSG0000003547823
Mbd3l1 / Q9D9H3 / methyl-CpG binding domain protein 3-like 1 / Q8WWY6*ENSMUSG0000003869123
Mbd2 / Q9Z2E1 / Methyl-CpG-binding domain protein 2 / Q9UBB5*ENSMUSG0000002451320


Protein motifs (from Interpro)
Interpro ID Name
 IPR025884  Methyl-CpG binding protein 2/3, C-terminal domain
 IPR032343  Methyl-CpG-binding domain protein 2/3, p55-binding region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006346 methylation-dependent chromatin silencing IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0008327 methyl-CpG binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Mbd3l1tm1Gpp/Mbd3l1tm1Gpp,Mbd3l2tm1Gpp/Mbd3l2tm1Gpp
Genetic Background: involves: 129S1/Sv

Allelic Composition: Mbd3l2tm1Gpp/Mbd3l2tm1Gpp
Genetic Background: involves: 129S1/Sv

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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