ENSGALG00000001968


Gallus gallus

Features
Gene ID: ENSGALG00000001968
  
Biological name :SYT6
  
Synonyms : synaptotagmin 6 / SYT6
  
Possible biological names infered from orthology : Q5T7P8 / Q9R0N8 / synaptotagmin VI
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 3814651
Gene end: 3824158
  
Corresponding Affymetrix probe sets: GgaAffx.1302.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003054
NCBI entrez gene - 428270     See in Manteia.
RefSeq - XM_425830
swissprot - F1P5I7
Ensembl - ENSGALG00000001968
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt6aENSDARG00000076730Danio rerio
 syt6bENSDARG00000031463Danio rerio
 SYT6ENSG00000134207Homo sapiens
 Syt6ENSMUSG00000027849Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYT10 / synaptotagmin 10 / Q6XYQ8* / Q9R0N4* / synaptotagmin X*ENSGALG0000001291171
SYT9 / synaptotagmin 9 / Q86SS6* / Q9R0N9*ENSGALG0000000526557
SYT1 / P47191 / Synaptotagmin-1 / P46096* / P21579* / synaptotagmin I*ENSGALG0000004109435
SYT7 / synaptotagmin 7 / O43581* / Q9R0N7*ENSGALG0000004313933
SYT2 / synaptotagmin 2 / Q8N9I0* / synaptotagmin II*ENSGALG0000002603333
SYT8 / synaptotagmin 8 / Q8NBV8* / Q9R0N6* / synaptotagmin VIII*ENSGALG0000000660230
SYT4 / synaptotagmin 4 / P40749* / Q9H2B2*ENSGALG0000004262628
SYT11 / synaptotagmin 11 / Q9BT88* / Q9R0N3*ENSGALG0000001464627


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin
 IPR028701  Synaptotagmin-6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0007340 acrosome reaction IEA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 biological_processGO:0060478 acrosomal vesicle exocytosis IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0097038 perinuclear endoplasmic reticulum IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0001786 phosphatidylserine binding IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IEA
 molecular_functionGO:0019905 syntaxin binding IEA
 molecular_functionGO:0030276 clathrin binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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