ENSGALG00000002647


Gallus gallus

Features
Gene ID: ENSGALG00000002647
  
Biological name :PLS1
  
Synonyms : P19179 / Plastin-1 / PLS1
  
Possible biological names infered from orthology : Q14651 / Q3V0K9
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 10508600
Gene end: 10546820
  
Corresponding Affymetrix probe sets: Gga.749.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004164
Ensembl peptide - ENSGALP00000056193
NCBI entrez gene - 396291     See in Manteia.
RefSeq - XM_015276845
RefSeq - NM_205347
RefSeq - XM_015276843
RefSeq - XM_015276844
RefSeq - XM_015276838
RefSeq - XM_015276839
RefSeq - XM_015276840
RefSeq - XM_015276841
RefSeq - XM_015276842
RefSeq Peptide - NP_990678
swissprot - P19179
Ensembl - ENSGALG00000002647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pls1ENSDARG00000039272Danio rerio
 PLS1ENSG00000120756Homo sapiens
 Pls1ENSMUSG00000049493Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLS3 / plastin-3 / P13797* / Q99K51* / Mus musculus plastin 3 (T-isoform) (Pls3), transcript variant 4, mRNA.*ENSGALG0000000593073
LCP1 / plastin-2 / P13796* / Q61233* / lymphocyte cytosolic protein 1*ENSGALG0000001698670


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR030235  Plastin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001951 intestinal D-glucose absorption IEA
 biological_processGO:0032532 regulation of microvillus length IEA
 biological_processGO:0040018 positive regulation of multicellular organism growth IEA
 biological_processGO:0051017 actin filament bundle assembly IBA
 biological_processGO:0051639 actin filament network formation IBA
 biological_processGO:0051764 actin crosslink formation IBA
 biological_processGO:1902896 terminal web assembly IEA
 biological_processGO:1903078 positive regulation of protein localization to plasma membrane IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005884 actin filament IBA
 cellular_componentGO:0005903 brush border TAS
 cellular_componentGO:0032432 actin filament bundle IBA
 cellular_componentGO:1990357 terminal web IEA
 molecular_functionGO:0003779 actin binding TAS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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