ENSGALG00000002864


Gallus gallus

Features
Gene ID: ENSGALG00000002864
  
Biological name :LRRTM3
  
Synonyms : leucine rich repeat transmembrane neuronal 3 / LRRTM3
  
Possible biological names infered from orthology : Leucine-rich repeat transmembrane neuronal protein 3 / Q86VH5 / Q8BZ81
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 6817132
Gene end: 6898256
  
Corresponding Affymetrix probe sets: Gga.16173.1.S1_at (Chicken Array)   GgaAffx.25660.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033454
NCBI entrez gene - 423649     See in Manteia.
RefSeq - NM_001199545
RefSeq - XM_015288097
RefSeq Peptide - NP_001186474
swissprot - F1NPI9
Ensembl - ENSGALG00000002864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRTM3ENSG00000198739Homo sapiens
 Lrrtm3ENSMUSG00000042846Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRTM4 / leucine rich repeat transmembrane neuronal 4 / Q80XG9* / Q86VH4* / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA.*ENSGALG0000000047656
LRRTM1 / leucine rich repeat transmembrane neuronal 1 / Q86UE6* / Q8K377* / Leucine-rich repeat transmembrane neuronal protein 1 *ENSGALG0000001596741
LRRTM2 / leucine rich repeat transmembrane neuronal 2 / O43300* / Q8BGA3* / Leucine-rich repeat transmembrane neuronal protein 2 *ENSGALG0000000245527
TRIL / TLR4 interactor with leucine rich repeats / Q7L0X0* / Q9DBY4*ENSGALG0000001114520
LRRC15 / leucine rich repeat containing 15 / Q80X72* / Q8TF66* / Leucine-rich repeat-containing protein 15 *ENSGALG0000004646118
CHADL / chondroadherin like / E9Q7T7* / Q6NUI6* / Chondroadherin-like protein *ENSGALG0000001197017
GP5 / glycoprotein V platelet / P40197*ENSGALG0000004512517
NYX / nyctalopin / P83503* / Q9GZU5*ENSGALG0000001622817
CPN2 / carboxypeptidase N subunit 2 / P22792* / Q9DBB9*ENSGALG0000004577617
IGFALS / insulin like growth factor binding protein acid labile subunit / P35858*ENSGALG0000000232517
ENSGALG0000004231812
CHAD / chondroadherin / O15335* / O55226*ENSGALG000000197618


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 biological_processGO:1902004 positive regulation of amyloid-beta formation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr