ENSGALG00000002455


Gallus gallus

Features
Gene ID: ENSGALG00000002455
  
Biological name :LRRTM2
  
Synonyms : leucine rich repeat transmembrane neuronal 2 / LRRTM2
  
Possible biological names infered from orthology : Leucine-rich repeat transmembrane neuronal protein 2 / O43300 / Q8BGA3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 2640113
Gene end: 2642017
  
Corresponding Affymetrix probe sets: GgaAffx.1646.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003863
NCBI entrez gene - 101747697     See in Manteia.
RefSeq - XM_004944770
RefSeq - XM_015293618
swissprot - F1NWG8
Ensembl - ENSGALG00000002455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrtm2ENSDARG00000071374Danio rerio
 LRRTM2ENSG00000146006Homo sapiens
 Lrrtm2ENSMUSG00000071862Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRTM1 / leucine rich repeat transmembrane neuronal 1 / Q86UE6* / Q8K377* / Leucine-rich repeat transmembrane neuronal protein 1 *ENSGALG0000001596747
LRRTM3 / leucine rich repeat transmembrane neuronal 3 / Q86VH5* / Q8BZ81* / Leucine-rich repeat transmembrane neuronal protein 3 *ENSGALG0000000286441
LRRTM4 / leucine rich repeat transmembrane neuronal 4 / Q80XG9* / Q86VH4* / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA.*ENSGALG0000000047638
TRIL / TLR4 interactor with leucine rich repeats / Q7L0X0* / Q9DBY4*ENSGALG0000001114522
GP5 / glycoprotein V platelet / P40197*ENSGALG0000004512521
CPN2 / carboxypeptidase N subunit 2 / P22792* / Q9DBB9*ENSGALG0000004577619
NYX / nyctalopin / P83503* / Q9GZU5*ENSGALG0000001622819
LRRC15 / leucine rich repeat containing 15 / Q80X72* / Q8TF66* / Leucine-rich repeat-containing protein 15 *ENSGALG0000004646118
IGFALS / insulin like growth factor binding protein acid labile subunit / P35858*ENSGALG0000000232517
CHADL / chondroadherin like / E9Q7T7* / Q6NUI6* / Chondroadherin-like protein *ENSGALG0000001197016
CHAD / chondroadherin / O15335* / O55226*ENSGALG0000001976113
ENSGALG0000004231811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002091 negative regulation of receptor internalization IEA
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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