ENSDARG00000071374


Danio rerio

Features
Gene ID: ENSDARG00000071374
  
Biological name :lrrtm2
  
Synonyms : leucine rich repeat transmembrane neuronal 2 / lrrtm2
  
Possible biological names infered from orthology : Leucine-rich repeat transmembrane neuronal protein 2 / O43300 / Q8BGA3
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 34606966
Gene end: 34612832
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000096250
NCBI entrez gene - 100538061     See in Manteia.
RefSeq - XM_009297589
swissprot - F1R4D3
ZFIN ID - ZDB-GENE-080327-8
Ensembl - ENSDARG00000071374
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRTM2ENSGALG00000002455Gallus gallus
 LRRTM2ENSG00000146006Homo sapiens
 Lrrtm2ENSMUSG00000071862Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrtm1 / leucine rich repeat transmembrane neuronal 1 / Q86UE6* / Q8K377* / Leucine-rich repeat transmembrane neuronal protein 1 *ENSDARG0000005271344
lrrtm4l2 / leucine rich repeat transmembrane neuronal 4 like 2 / LRRTM4* / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSDARG0000009938637
lrrtm4l1 / leucine rich repeat transmembrane neuronal 4 like 1 / LRRTM4* / Q80XG9* / Q86VH4* / leucine rich repeat transmembrane neuronal 4* / Mus musculus leucine rich repeat transmembrane...ENSDARG0000008001537
si:dkey-28o19.1 / LRRTM4* / Q80XG9* / Q86VH4* / leucine rich repeat transmembrane neuronal 4* / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA.*ENSDARG0000007883936
CABZ01102147.1 / LRRTM4* / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSDARG0000010652236
tril / TLR4 interactor with leucine-rich repeats / Q7L0X0*ENSDARG0000010079120
igfals / insulin-like growth factor binding protein, acid labile subunit / P35858*ENSDARG0000003783620
chadlb / chondroadherin-like b / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000007590319
chadla / chondroadherin-like a / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000005516018
si:dkey-182i3.11ENSDARG0000006927017
lrrc15 / leucine rich repeat containing 15 / Q80X72* / Q8TF66* / Leucine-rich repeat-containing protein 15 *ENSDARG0000007079217
nyx / nyctalopin / P83503* / Q9GZU5*ENSDARG0000006179116
zgc:153913 / CPN2* / P22792* / carboxypeptidase N subunit 2*ENSDARG0000006351816
si:ch211-117l17.7 / GP5* / P40197* / glycoprotein V platelet*ENSDARG0000010021715
si:dkey-1j5.4ENSDARG0000007374714
chad / chondroadherin / O15335* / O55226*ENSDARG0000004507111


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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