ENSDARG00000080015


Danio rerio

Features
Gene ID: ENSDARG00000080015
  
Biological name :lrrtm4l1
  
Synonyms : leucine rich repeat transmembrane neuronal 4 like 1 / lrrtm4l1
  
Possible biological names infered from orthology : leucine rich repeat transmembrane neuronal 4 / LRRTM4 / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA. / Q80XG9 / Q86VH4
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 19310688
Gene end: 19394491
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101739
Ensembl peptide - ENSDARP00000113316
swissprot - F1QVN0
swissprot - F1RB85
ZFIN ID - ZDB-GENE-080327-15
Ensembl - ENSDARG00000080015
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRTM4ENSGALG00000000476Gallus gallus
 LRRTM4ENSG00000176204Homo sapiens
 Lrrtm4ENSMUSG00000052581Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrtm4l2 / leucine rich repeat transmembrane neuronal 4 like 2 / LRRTM4* / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSDARG0000009938656
CABZ01102147.1 / LRRTM4* / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSDARG0000010652251
si:dkey-28o19.1 / LRRTM4* / Q80XG9* / Q86VH4* / leucine rich repeat transmembrane neuronal 4* / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA.*ENSDARG0000007883951
lrrtm1 / leucine rich repeat transmembrane neuronal 1 / Q86UE6* / Q8K377* / Leucine-rich repeat transmembrane neuronal protein 1 *ENSDARG0000005271335
lrrtm2 / leucine rich repeat transmembrane neuronal 2 / O43300* / Q8BGA3* / Leucine-rich repeat transmembrane neuronal protein 2 *ENSDARG0000007137434
tril / TLR4 interactor with leucine-rich repeats / Q7L0X0*ENSDARG0000010079118
igfals / insulin-like growth factor binding protein, acid labile subunit / P35858*ENSDARG0000003783618
chadla / chondroadherin-like a / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000005516018
lrrc15 / leucine rich repeat containing 15 / Q80X72* / Q8TF66* / Leucine-rich repeat-containing protein 15 *ENSDARG0000007079216
chadlb / chondroadherin-like b / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000007590316
zgc:153913 / CPN2* / P22792* / carboxypeptidase N subunit 2*ENSDARG0000006351815
si:dkey-182i3.11ENSDARG0000006927015
nyx / nyctalopin / P83503* / Q9GZU5*ENSDARG0000006179114
si:ch211-117l17.7 / GP5* / P40197* / glycoprotein V platelet*ENSDARG0000010021714
si:dkey-1j5.4ENSDARG0000007374713
chad / chondroadherin / O15335* / O55226*ENSDARG000000450718


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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