ENSDARG00000106522


Danio rerio

Features
Gene ID: ENSDARG00000106522
  
Biological name :CABZ01102147.1
  
Synonyms : CABZ01102147.1
  
Possible biological names infered from orthology : leucine rich repeat transmembrane neuronal 4 / LRRTM4 / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA. / Q80XG9 / Q86VH4
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 5844174
Gene end: 5850472
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143297
Ensembl peptide - ENSDARP00000156100
swissprot - A0A286Y827
Ensembl - ENSDARG00000106522
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRTM4ENSGALG00000000476Gallus gallus
 LRRTM4ENSG00000176204Homo sapiens
 Lrrtm4ENSMUSG00000052581Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-28o19.1 / LRRTM4* / Q80XG9* / Q86VH4* / leucine rich repeat transmembrane neuronal 4* / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA.*ENSDARG0000007883963
lrrtm4l2 / leucine rich repeat transmembrane neuronal 4 like 2 / LRRTM4* / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSDARG0000009938652
lrrtm4l1 / leucine rich repeat transmembrane neuronal 4 like 1 / LRRTM4* / Q80XG9* / Q86VH4* / leucine rich repeat transmembrane neuronal 4* / Mus musculus leucine rich repeat transmembrane...ENSDARG0000008001551
lrrtm1 / leucine rich repeat transmembrane neuronal 1 / Q86UE6* / Q8K377* / Leucine-rich repeat transmembrane neuronal protein 1 *ENSDARG0000005271336
lrrtm2 / leucine rich repeat transmembrane neuronal 2 / O43300* / Q8BGA3* / Leucine-rich repeat transmembrane neuronal protein 2 *ENSDARG0000007137434
chadla / chondroadherin-like a / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000005516017
igfals / insulin-like growth factor binding protein, acid labile subunit / P35858*ENSDARG0000003783617
chadlb / chondroadherin-like b / CHADL* / Q6NUI6* / E9Q7T7* / chondroadherin like* / Chondroadherin-like protein *ENSDARG0000007590317
tril / TLR4 interactor with leucine-rich repeats / Q7L0X0*ENSDARG0000010079117
lrrc15 / leucine rich repeat containing 15 / Q80X72* / Q8TF66* / Leucine-rich repeat-containing protein 15 *ENSDARG0000007079215
nyx / nyctalopin / P83503* / Q9GZU5*ENSDARG0000006179115
si:dkey-182i3.11ENSDARG0000006927014
si:ch211-117l17.7 / GP5* / P40197* / glycoprotein V platelet*ENSDARG0000010021714
zgc:153913 / CPN2* / P22792* / carboxypeptidase N subunit 2*ENSDARG0000006351814
si:dkey-1j5.4ENSDARG0000007374713
chad / chondroadherin / O15335* / O55226*ENSDARG000000450719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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