ENSMUSG00000071862


Mus musculus

Features
Gene ID: ENSMUSG00000071862
  
Biological name :Lrrtm2
  
Synonyms : Leucine-rich repeat transmembrane neuronal protein 2 / Lrrtm2 / Q8BGA3
  
Possible biological names infered from orthology : leucine rich repeat transmembrane neuronal 2 / O43300
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: B1
Gene start: 35209011
Gene end: 35215024
  
Corresponding Affymetrix probe sets: 10458247 (MoGene1.0st)   1437787_at (Mouse Genome 430 2.0 Array)   1455489_at (Mouse Genome 430 2.0 Array)   1456637_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000089225
NCBI entrez gene - 107065     See in Manteia.
MGI - MGI:2389174
RefSeq - NM_178005
RefSeq Peptide - NP_821072
swissprot - Q8BGA3
Ensembl - ENSMUSG00000071862
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrtm2ENSDARG00000071374Danio rerio
 LRRTM2ENSGALG00000002455Gallus gallus
 LRRTM2ENSG00000146006Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrrtm1 / Q8K377 / Leucine-rich repeat transmembrane neuronal protein 1 / Q86UE6* / leucine rich repeat transmembrane neuronal 1*ENSMUSG0000006078047
Lrrtm3 / Q8BZ81 / Leucine-rich repeat transmembrane neuronal protein 3 / Q86VH5* / leucine rich repeat transmembrane neuronal 3*ENSMUSG0000004284643
Lrrtm4 / Q80XG9 / Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), transcript variant 4, mRNA. / Q86VH4* / leucine rich repeat transmembrane neuronal 4*ENSMUSG0000005258142
Tril / Q9DBY4 / TLR4 interactor with leucine rich repeats / Q7L0X0*ENSMUSG0000004349622
Gp5 / glycoprotein V platelet / P40197*ENSMUSG0000004795322
Chadl / E9Q7T7 / Chondroadherin-like protein / Q6NUI6* / chondroadherin like*ENSMUSG0000006376520
Igfals / insulin-like growth factor binding protein, acid labile subunit / P35858*ENSMUSG0000004607020
Lrrc15 / Q80X72 / Leucine-rich repeat-containing protein 15 / Q8TF66* / leucine rich repeat containing 15*ENSMUSG0000005231620
Cpn2 / Q9DBB9 / Carboxypeptidase N subunit 2 / P22792*ENSMUSG0000002317618
Nyx / P83503 / Nyctalopin / Q9GZU5*ENSMUSG0000005122817
Chad / O55226 / Chondroadherin / O15335*ENSMUSG0000003908410


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002091 negative regulation of receptor internalization IGI
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:0051965 positive regulation of synapse assembly IDA
 biological_processGO:0060291 long-term synaptic potentiation IGI
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:0060076 excitatory synapse IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042043 neurexin family protein binding IEA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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