ENSGALG00000003307


Gallus gallus

Features
Gene ID: ENSGALG00000003307
  
Biological name :TMED2
  
Synonyms : TMED2 / transmembrane p24 trafficking protein 2
  
Possible biological names infered from orthology : Q15363 / Q9R0Q3
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 4995019
Gene end: 5000995
  
Corresponding Affymetrix probe sets: Gga.17144.1.S1_at (Chicken Array)   Gga.17144.1.S1_s_at (Chicken Array)   GgaAffx.12277.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005231
NCBI entrez gene - 416821     See in Manteia.
RefSeq - NM_001006186
RefSeq Peptide - NP_001006186
swissprot - Q5ZKB0
Ensembl - ENSGALG00000003307
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmed2ENSDARG00000026908Danio rerio
 TMED2ENSG00000086598Homo sapiens
 Tmed2ENSMUSG00000029390Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMED7 / Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. / TMED7-TICAM2* / TMED7-TICAM2 readthrough* / transmembrane p24 trafficking protein 7*ENSGALG0000002848433
TMED3 / transmembrane emp24 domain-containing protein 3 isoform 1 precursor / Q9Y3Q3* / Q78IS1* / transmembrane p24 trafficking protein 3* / Transmembrane emp24 domain-containing protein 3 *ENSGALG0000000827227
TMED5 / transmembrane p24 trafficking protein 5 / Q9CXE7* / Q9Y3A6*ENSGALG0000000590425


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0001892 embryonic placenta development IEA
 biological_processGO:0001893 maternal placenta development IEA
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0032525 somite rostral/caudal axis specification IEA
 biological_processGO:0034260 negative regulation of GTPase activity IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0036342 post-anal tail morphogenesis IEA
 biological_processGO:0048598 embryonic morphogenesis IEA
 biological_processGO:0060716 labyrinthine layer blood vessel development IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA


Pathways (from Reactome)
Pathway description
Pre-NOTCH Processing in Golgi
COPII-mediated vesicle transport
Cargo concentration in the ER
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000017343 FOLR1 / folate receptor alpha precursor / FOLR3* / FOLR2* / Q9EQF4* / P14207* / P15328* / P35846* / P41439* / Q05685* / A6ND01* / IZUMO1R* / folate receptor 3* / folate receptor 1* / folat...  / complex / reaction
 ENSGALG00000028265 SURF4 / Q800K9 / Surfeit locus protein 4 / Q64310* / O15260* / surfeit 4*  / complex
 ENSGALG00000003307 TMED2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr