ENSGALG00000003397


Gallus gallus

Features
Gene ID: ENSGALG00000003397
  
Biological name :RHOT1
  
Synonyms : mitochondrial Rho GTPase 1 / RHOT1
  
Possible biological names infered from orthology : Q8BG51 / Q8IXI2 / ras homolog family member T1
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 6724489
Gene end: 6747758
  
Corresponding Affymetrix probe sets: GgaAffx.11614.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046261
Ensembl peptide - ENSGALP00000060877
Ensembl peptide - ENSGALP00000005362
NCBI entrez gene - 417410     See in Manteia.
RefSeq - XM_015279887
RefSeq - XM_015279883
RefSeq - XM_015279884
RefSeq - XM_015279885
RefSeq - XM_015279886
RefSeq - NM_001006208
RefSeq - XM_015279881
RefSeq - XM_015279882
RefSeq Peptide - NP_001006208
swissprot - A0A1L1RQ01
swissprot - F1NSQ4
swissprot - A0A1D5P0T2
Ensembl - ENSGALG00000003397
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6NVC5ENSDARG00000099996Danio rerio
 rhot1bENSDARG00000103313Danio rerio
 RHOT1ENSG00000126858Homo sapiens
 Rhot1ENSMUSG00000017686Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RHOT2 / mitochondrial Rho GTPase 2 / Q8IXI1* / Q8JZN7* / Gm20683* / ras homolog family member T2*ENSGALG0000000249763


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR002048  EF-hand domain
 IPR005225  Small GTP-binding protein domain
 IPR011992  EF-hand domain pair
 IPR013566  EF hand associated, type-1
 IPR013567  EF hand associated, type-2
 IPR018247  EF-Hand 1, calcium-binding site
 IPR020860  MIRO domain
 IPR021181  Mitochondrial Rho GTPase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0019725 cellular homeostasis IEA
 biological_processGO:0047497 mitochondrion transport along microtubule IEA
 biological_processGO:0097345 mitochondrial outer membrane permeabilization IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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