ENSGALG00000003461


Gallus gallus

Features
Gene ID: ENSGALG00000003461
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q6P9L4 / Q70CQ1 / ubiquitin specific peptidase 49 / USP49
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 4994619
Gene end: 5002981
  
Corresponding Affymetrix probe sets: Gga.2264.1.S1_at (Chicken Array)   GgaAffx.2160.1.S1_at (Chicken Array)   GgaAffx.2160.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057120
NCBI entrez gene - 419925     See in Manteia.
RefSeq - XM_001231681
RefSeq - XM_015298971
swissprot - A0A1D5PVZ1
Ensembl - ENSGALG00000003461
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp49ENSDARG00000000229Danio rerio
 USP49ENSG00000164663Homo sapiens
 Usp49ENSMUSG00000090115Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP44 / ubiquitin specific peptidase 44 / Q8C2S0* / Q9H0E7*ENSGALG0000001140065
USP3 / ubiquitin specific peptidase 3 / Q91W36* / Q9Y6I4*ENSGALG0000000342725
USP51* / Q70EK9* / Q8CEG8* / A6NNY8* / B1AY15* / USP27X* / ubiquitin specific protease 51* / ubiquitin specific peptidase 51* / ubiquitin specific peptidase 27, X-linked* / ubiquitin specif...ENSGALG0000002981723
USP36 / ubiquitin specific peptidase 36 / B1AQJ2* / Q9P275*ENSGALG0000003701820
USP42 / ubiquitin specific peptidase 42 / B2RQC2* / Q9H9J4*ENSGALG0000000337818
USP49* / Q6P9L4* / Q70CQ1* / ubiquitin specific peptidase 49*ENSGALG000000441320


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr