ENSGALG00000003427


Gallus gallus

Features
Gene ID: ENSGALG00000003427
  
Biological name :USP3
  
Synonyms : ubiquitin specific peptidase 3 / USP3
  
Possible biological names infered from orthology : Q91W36 / Q9Y6I4
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 3979108
Gene end: 3998647
  
Corresponding Affymetrix probe sets: GgaAffx.2129.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053431
Ensembl peptide - ENSGALP00000005410
NCBI entrez gene - 415369     See in Manteia.
RefSeq - XM_413755
RefSeq - XM_015278952
RefSeq - XM_015278953
swissprot - F1NQJ6
swissprot - A0A1D5PKS0
Ensembl - ENSGALG00000003427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp3ENSDARG00000045641Danio rerio
 USP3ENSG00000140455Homo sapiens
 Usp3ENSMUSG00000032376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP44 / ubiquitin specific peptidase 44 / Q8C2S0* / Q9H0E7*ENSGALG0000001140034
USP49* / Q6P9L4* / Q70CQ1* / ubiquitin specific peptidase 49*ENSGALG0000000346127
USP51* / Q70EK9* / Q8CEG8* / A6NNY8* / B1AY15* / USP27X* / ubiquitin specific protease 51* / ubiquitin specific peptidase 51* / ubiquitin specific peptidase 27, X-linked* / ubiquitin specif...ENSGALG0000002981726
USP36 / ubiquitin specific peptidase 36 / B1AQJ2* / Q9P275*ENSGALG0000003701821
USP42 / ubiquitin specific peptidase 42 / B2RQC2* / Q9H9J4*ENSGALG0000000337820
USP49* / Q6P9L4* / Q70CQ1* / ubiquitin specific peptidase 49*ENSGALG000000441321


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR001607  Zinc finger, UBP-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016578 histone deubiquitination IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0031647 regulation of protein stability IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 cellular_componentGO:0090543 Flemming body IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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