ENSGALG00000003895


Gallus gallus

Features
Gene ID: ENSGALG00000003895
  
Biological name :PRDM12
  
Synonyms : PRDM12 / PR/SET domain 12
  
Possible biological names infered from orthology : A2AJ77 / PR domain zinc finger protein 12 / Q9H4Q4
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6421491
Gene end: 6427617
  
Corresponding Affymetrix probe sets: Gga.16856.1.S1_at (Chicken Array)   Gga.17119.1.S1_at (Chicken Array)   GgaAffx.26047.1.S1_at (Chicken Array)   GgaAffx.26047.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006182
NCBI entrez gene - 417183     See in Manteia.
RefSeq - XM_415465
swissprot - E1C6K0
Ensembl - ENSGALG00000003895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prdm12bENSDARG00000007430Danio rerio
 PRDM12ENSG00000130711Homo sapiens
 A2AJ77ENSMUSG00000079466Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM6 / PR/SET domain 6 / Q3UZD5* / Q9NQX0* / Putative histone-lysine N-methyltransferase PRDM6 *ENSGALG0000000535129
PRDM4 / PR/SET domain 4 / Q80V63* / Q9UKN5* / PR domain zinc finger protein 4 *ENSGALG0000001261923
ENSGALG0000003343920


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013087  Zinc finger C2H2-type
 IPR017126  PR-domain zinc finger protein PRDM12


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0019233 sensory perception of pain IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0050965 detection of temperature stimulus involved in sensory perception of pain IEA
 biological_processGO:0051574 positive regulation of histone H3-K9 methylation IEA
 biological_processGO:1900111 positive regulation of histone H3-K9 dimethylation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:1990226 histone methyltransferase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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