ENSGALG00000004174


Gallus gallus

Features
Gene ID: ENSGALG00000004174
  
Biological name :VPS26A
  
Synonyms : VPS26A / VPS26, retromer complex component A
  
Possible biological names infered from orthology : O75436 / P40336
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 10821779
Gene end: 10833557
  
Corresponding Affymetrix probe sets: Gga.4716.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006624
Ensembl peptide - ENSGALP00000059838
NCBI entrez gene - 423696     See in Manteia.
RefSeq - XM_421577
swissprot - A0A1L1RM52
swissprot - E1BU33
Ensembl - ENSGALG00000004174
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6TNP8ENSDARG00000056549Danio rerio
 O75436ENSG00000122958Homo sapiens
 P40336ENSMUSG00000020078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS26B / VPS26, retromer complex component B / Q4G0F5* / Q8C0E2*ENSGALG0000000152167


Protein motifs (from Interpro)
Interpro ID Name
 IPR028934  Vacuolar protein sorting protein 26 related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:1990126 retrograde transport, endosome to plasma membrane IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0030904 retromer complex IEA
 cellular_componentGO:0030906 retromer, cargo-selective complex IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0097422 tubular endosome IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005951 VPS29L / VPS29* / Q9QZ88* / Q9UBQ0* / VPS29, retromer complex component*  / complex
 ENSGALG00000004529 VPS29 / Q5ZIL2 / Vacuolar protein sorting-associated protein 29 / Q9UBQ0* / Q9QZ88* / VPS29, retromer complex component*  / complex
 ENSGALG00000015304 SNX3 / sorting nexin 3 / O60493*  / complex / reaction






 

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