ENSGALG00000004531


Gallus gallus

Features
Gene ID: ENSGALG00000004531
  
Biological name :PLOD1
  
Synonyms : PLOD1 / procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 precursor
  
Possible biological names infered from orthology : procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 / Q02809 / Q9R0E2
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 5514105
Gene end: 5531231
  
Corresponding Affymetrix probe sets: Gga.4726.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007204
NCBI entrez gene - 419485     See in Manteia.
RefSeq - NM_001005618
RefSeq Peptide - NP_001005618
swissprot - F1NMF6
Ensembl - ENSGALG00000004531
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plod1aENSDARG00000059746Danio rerio
 PLOD1ENSG00000083444Homo sapiens
 Plod1ENSMUSG00000019055Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLOD2 / procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 / O00469* / Q9R0B9*ENSGALG0000000678359
COLGALT2 / collagen beta(1-O)galactosyltransferase 2 / Q6NVG7* / Q8IYK4* / Procollagen galactosyltransferase 2 *ENSGALG0000003832015
CERCAM / cerebral endothelial cell adhesion molecule / A3KGW5* / Q5T4B2* / Inactive glycosyltransferase 25 family member 3 *ENSGALG0000000498614


Protein motifs (from Interpro)
Interpro ID Name
 IPR001006  Procollagen-lysine 5-dioxygenase
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR006620  Prolyl 4-hydroxylase, alpha subunit
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0017185 peptidyl-lysine hydroxylation IEA
 biological_processGO:0046947 hydroxylysine biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:1902494 catalytic complex IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008475 procollagen-lysine 5-dioxygenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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