ENSGALG00000004542


Gallus gallus

Features
Gene ID: ENSGALG00000004542
  
Biological name :ZMYND8
  
Synonyms : zinc finger MYND-type containing 8 / ZMYND8
  
Possible biological names infered from orthology : Q9ULU4
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 5956857
Gene end: 5997973
  
Corresponding Affymetrix probe sets: Gga.10104.1.S1_s_at (Chicken Array)   Gga.1362.2.S1_a_at (Chicken Array)   GgaAffx.26243.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050691
Ensembl peptide - ENSGALP00000056182
Ensembl peptide - ENSGALP00000052710
Ensembl peptide - ENSGALP00000007220
NCBI entrez gene - 419207     See in Manteia.
RefSeq - XM_015296714
RefSeq - XM_015296710
RefSeq - XM_015296711
RefSeq - XM_015296712
RefSeq - XM_015296713
RefSeq - XM_004947062
RefSeq - XM_004947063
RefSeq - XM_004947064
RefSeq - XM_004947065
RefSeq - XM_004947066
RefSeq - XM_004947067
RefSeq - XM_004947068
RefSeq - XM_015296701
RefSeq - XM_015296702
RefSeq - XM_015296703
RefSeq - XM_015296704
RefSeq - XM_015296705
RefSeq - XM_015296707
RefSeq - XM_015296708
RefSeq - XM_015296709
swissprot - A0A1D5PTD7
swissprot - A0A1D5PIS4
swissprot - F1NME8
swissprot - A0A1D5PD50
Ensembl - ENSGALG00000004542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prkcbp1lENSDARG00000011932Danio rerio
 zmynd8ENSDARG00000007601Danio rerio
 Q9ULU4ENSG00000101040Homo sapiens
 Zmynd8ENSMUSG00000039671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF1* / TAF1L* / Q80UV9* / Q8IZX4* / P21675* / TATA-box binding protein associated factor 1* / TATA-box binding protein associated factor 1 like*ENSGALG0000000546416
ZMYND11 / zinc finger MYND-type containing 11 / Q15326* / Q8R5C8* / zinc finger, MYND domain containing 11*ENSGALG0000000659916


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR002893  Zinc finger, MYND-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR021931  Protein kinase C-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030336 negative regulation of cell migration IEA
 biological_processGO:1903758 negative regulation of transcription from RNA polymerase II promoter by histone modification IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0035064 methylated histone binding IEA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070577 lysine-acetylated histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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