ENSGALG00000006599


Gallus gallus

Features
Gene ID: ENSGALG00000006599
  
Biological name :ZMYND11
  
Synonyms : zinc finger MYND-type containing 11 / ZMYND11
  
Possible biological names infered from orthology : Q15326 / Q8R5C8 / zinc finger, MYND domain containing 11
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 9883490
Gene end: 9946309
  
Corresponding Affymetrix probe sets: Gga.10687.1.S1_at (Chicken Array)   Gga.11911.2.S1_a_at (Chicken Array)   Gga.1692.1.S1_at (Chicken Array)   GgaAffx.21984.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010636
Ensembl peptide - ENSGALP00000054459
NCBI entrez gene - 420455     See in Manteia.
RefSeq - XM_418557
RefSeq - XM_015282144
RefSeq - XM_015282145
RefSeq - XM_004939163
RefSeq - XM_004939164
RefSeq - XM_015282143
swissprot - E1BUC1
swissprot - A0A1D5PNL6
Ensembl - ENSGALG00000006599
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmynd11ENSDARG00000057249Danio rerio
 Q15326ENSG00000015171Homo sapiens
 Q8R5C8ENSMUSG00000021156Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZMYND8 / zinc finger MYND-type containing 8 / Q9ULU4*ENSGALG0000000454229
TAF1* / TAF1L* / Q80UV9* / Q8IZX4* / P21675* / TATA-box binding protein associated factor 1* / TATA-box binding protein associated factor 1 like*ENSGALG0000000546414


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR002893  Zinc finger, MYND-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0046329 negative regulation of JNK cascade IEA
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0035064 methylated histone binding IEA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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