ENSMUSG00000021156


Mus musculus

Features
Gene ID: ENSMUSG00000021156
  
Biological name :Zmynd11
  
Synonyms : Q8R5C8 / zinc finger, MYND domain containing 11 / Zmynd11
  
Possible biological names infered from orthology : Q15326 / zinc finger MYND-type containing 11
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A1
Gene start: 9684833
Gene end: 9765330
  
Corresponding Affymetrix probe sets: 10407570 (MoGene1.0st)   1426531_at (Mouse Genome 430 2.0 Array)   1426532_at (Mouse Genome 430 2.0 Array)   1436153_a_at (Mouse Genome 430 2.0 Array)   1444461_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000106266
Ensembl peptide - ENSMUSP00000106265
Ensembl peptide - ENSMUSP00000106267
Ensembl peptide - ENSMUSP00000152861
Ensembl peptide - ENSMUSP00000152774
Ensembl peptide - ENSMUSP00000152716
Ensembl peptide - ENSMUSP00000152352
Ensembl peptide - ENSMUSP00000152332
Ensembl peptide - ENSMUSP00000152106
Ensembl peptide - ENSMUSP00000122133
Ensembl peptide - ENSMUSP00000121574
Ensembl peptide - ENSMUSP00000118964
Ensembl peptide - ENSMUSP00000118002
Ensembl peptide - ENSMUSP00000117375
Ensembl peptide - ENSMUSP00000116635
Ensembl peptide - ENSMUSP00000116299
Ensembl peptide - ENSMUSP00000106268
Ensembl peptide - ENSMUSP00000059767
Ensembl peptide - ENSMUSP00000106263
Ensembl peptide - ENSMUSP00000106264
NCBI entrez gene - 66505     See in Manteia.
MGI - MGI:1913755
RefSeq - XM_017315570
RefSeq - NM_001347473
RefSeq - NM_001347474
RefSeq - NM_001347476
RefSeq - NM_001347477
RefSeq - NM_001347479
RefSeq - NM_001347480
RefSeq - NM_001347481
RefSeq - NM_144516
RefSeq - XM_006516491
RefSeq - XM_006516492
RefSeq - XM_006516493
RefSeq - XM_006516494
RefSeq - XM_006516496
RefSeq - XM_006516497
RefSeq - XM_006516498
RefSeq - XM_006516499
RefSeq - XM_006516500
RefSeq - XM_006516501
RefSeq - XM_006516502
RefSeq - XM_006516503
RefSeq - XM_006516504
RefSeq - XM_006516505
RefSeq - XM_006516506
RefSeq - XM_006516507
RefSeq - XM_017315566
RefSeq - XM_017315567
RefSeq - XM_017315568
RefSeq - XM_017315569
RefSeq - NM_001199141
RefSeq - NM_001347472
RefSeq Peptide - NP_001334408
RefSeq Peptide - NP_001334409
RefSeq Peptide - NP_001334410
RefSeq Peptide - NP_653099
RefSeq Peptide - NP_001334403
RefSeq Peptide - NP_001334405
RefSeq Peptide - NP_001334406
RefSeq Peptide - NP_001186070
RefSeq Peptide - NP_001334401
RefSeq Peptide - NP_001334402
swissprot - A0A1Y7VMG9
swissprot - A0A1Y7VM87
swissprot - A0A1Y7VLC0
swissprot - A0A1Y7VK96
swissprot - D3Z7P1
swissprot - Q8BJZ0
swissprot - Q8R5C8
swissprot - A0A1Y7VJ93
swissprot - A0A1Y7VJA3
swissprot - D3Z662
swissprot - D3Z500
swissprot - D3Z4G1
swissprot - D3Z2K4
swissprot - D3Z029
swissprot - D3YY86
swissprot - D3YY85
swissprot - D3YXX1
swissprot - D3YXR0
Ensembl - ENSMUSG00000021156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmynd11ENSDARG00000057249Danio rerio
 ZMYND11ENSGALG00000006599Gallus gallus
 Q15326ENSG00000015171Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zmynd8 / zinc finger, MYND-type containing 8 / Q9ULU4*ENSMUSG0000003967128
Taf1 / Q80UV9 / TATA-box binding protein associated factor 1 / TAF1L* / Q8IZX4* / P21675* / TATA-box binding protein associated factor 1 like*ENSMUSG0000003131413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR002893  Zinc finger, MYND-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR035505  ZMYND8/11, PWWP domain
 IPR036427  Bromodomain-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0034243 regulation of transcription elongation from RNA polymerase II promoter IMP
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling ISO
 biological_processGO:0046329 negative regulation of JNK cascade ISO
 biological_processGO:0051607 defense response to virus ISO
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003690 double-stranded DNA binding ISS
 molecular_functionGO:0003714 transcription corepressor activity IMP
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0035064 methylated histone binding IDA
 molecular_functionGO:0042393 histone binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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