ENSGALG00000004620


Gallus gallus

Features
Gene ID: ENSGALG00000004620
  
Biological name :LAMC1
  
Synonyms : LAMC1 / laminin subunit gamma 1
  
Possible biological names infered from orthology : P11047
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 7492312
Gene end: 7541469
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000038625
NCBI entrez gene - 424442     See in Manteia.
RefSeq - XM_001234658
swissprot - F1NI05
Ensembl - ENSGALG00000004620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lamc1ENSDARG00000036279Danio rerio
 LAMC1ENSG00000135862Homo sapiens
 Lamc1ENSMUSG00000026478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LAMA1 / laminin subunit alpha-1 precursor / P25391* / laminin subunit alpha 1*ENSGALG0000001461524
LAMA2 / laminin subunit alpha 2 / P24043* / Q60675*ENSGALG0000004238823
LAMB2 / laminin subunit beta 2 / P55268* / Q61292*ENSGALG0000000680219
LAMB4 / laminin subunit beta 4 / A4D0S4*ENSGALG0000000791718
LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSGALG0000004339014
LAMB1 / laminin subunit beta 1 / P02469* / P07942*ENSGALG0000000790512
LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSGALG0000001505610
LAMB3 / laminin subunit beta 3 / Q13751* / Q61087*ENSGALG000000013439
LAMA4* / P97927* / Q16363* / laminin subunit alpha 4*ENSGALG000000150019
ENSGALG000000063259
NTN4 / netrin 4 / Q9HB63* / Q9JI33*ENSGALG000000114069
LAMA5* / O15230* / Q61001* / laminin subunit alpha 5*ENSGALG000000053218


Protein motifs (from Interpro)
Interpro ID Name
 IPR000034  Laminin IV
 IPR000742  EGF-like domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0022617 extracellular matrix disassembly IEA
 biological_processGO:0031581 hemidesmosome assembly IEA
 biological_processGO:0034446 substrate adhesion-dependent cell spreading IEA
 biological_processGO:0065003 protein-containing complex assembly IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA


Pathways (from Reactome)
Pathway description
Laminin interactions
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
MET activates PTK2 signaling
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015001 LAMA4* / P97927* / Q16363* / laminin subunit alpha 4*  / complex
 ENSGALG00000034007 ITGA6 / integrin alpha-6 precursor / P23229* / Q61739* / integrin subunit alpha 6* / Integrin alpha-6 Integrin alpha-6 heavy chain Integrin alpha-6 light chain*  / reaction / complex
 ENSGALG00000007145 ITGB1 / integrin subunit beta 1 / P05556* / P09055* / Integrin beta-1 *  / complex / reaction






 

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