ENSGALG00000042388


Gallus gallus

Features
Gene ID: ENSGALG00000042388
  
Biological name :LAMA2
  
Synonyms : LAMA2 / laminin subunit alpha 2
  
Possible biological names infered from orthology : P24043 / Q60675
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 58293669
Gene end: 58629545
  
Corresponding Affymetrix probe sets: Gga.8352.1.S1_at (Chicken Array)   GgaAffx.24494.1.S1_at (Chicken Array)   GgaAffx.24521.1.S1_s_at (Chicken Array)   GgaAffx.8904.1.S1_at (Chicken Array)   GgaAffx.9380.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054625
NCBI entrez gene - 421709     See in Manteia.
RefSeq - XM_015284127
RefSeq - XM_015284130
RefSeq - XM_015284128
RefSeq - XM_015284129
swissprot - A0A1D5PP29
Ensembl - ENSGALG00000042388
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01065423.1ENSDARG00000112019Danio rerio
 lama2ENSDARG00000099390Danio rerio
 LAMA2ENSG00000196569Homo sapiens
 Lama2ENSMUSG00000019899Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LAMA1 / laminin subunit alpha-1 precursor / P25391* / laminin subunit alpha 1*ENSGALG0000001461545
LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSGALG0000004339014
LAMA4* / P97927* / Q16363* / laminin subunit alpha 4*ENSGALG0000001500113
LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSGALG0000001505612
LAMC1 / laminin subunit gamma 1 / P11047*ENSGALG0000000462012
LAMB4 / laminin subunit beta 4 / A4D0S4*ENSGALG0000000791711
LAMB2 / laminin subunit beta 2 / P55268* / Q61292*ENSGALG0000000680211
LAMA5* / O15230* / Q61001* / laminin subunit alpha 5*ENSGALG000000053219
LAMB1 / laminin subunit beta 1 / P02469* / P07942*ENSGALG000000079057
LAMB3 / laminin subunit beta 3 / Q13751* / Q61087*ENSGALG000000013435
ENSGALG000000063255
NTN4 / netrin 4 / Q9HB63* / Q9JI33*ENSGALG000000114065


Protein motifs (from Interpro)
Interpro ID Name
 IPR000034  Laminin IV
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR009254  Laminin alpha, domain I
 IPR010307  Laminin domain II
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0030155 regulation of cell adhesion IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0032224 positive regulation of synaptic transmission, cholinergic IEA
 biological_processGO:0045995 regulation of embryonic development IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005605 basal lamina IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0031012 extracellular matrix IEA
 cellular_componentGO:0042383 sarcolemma IEA
 molecular_functionGO:0005102 signaling receptor binding IEA


Pathways (from Reactome)
Pathway description
Laminin interactions
MET activates PTK2 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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