ENSGALG00000004671


Gallus gallus

Features
Gene ID: ENSGALG00000004671
  
Biological name :ANKRD27
  
Synonyms : ANKRD27 / ankyrin repeat domain 27
  
Possible biological names infered from orthology : Ankyrin repeat domain-containing protein 27 / Q3UMR0 / Q96NW4
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 9998400
Gene end: 10038995
  
Corresponding Affymetrix probe sets: Gga.11122.1.S1_s_at (Chicken Array)   Gga.15196.1.S1_s_at (Chicken Array)   Gga.17068.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051494
Ensembl peptide - ENSGALP00000007432
Ensembl peptide - ENSGALP00000042911
NCBI entrez gene - 415766     See in Manteia.
RefSeq - XM_015292438
RefSeq - XM_015292433
RefSeq - XM_015292435
RefSeq - XM_015292436
RefSeq - XM_015292437
RefSeq - NM_001135678
RefSeq - XM_015292432
RefSeq Peptide - NP_001129150
swissprot - F1NGS0
swissprot - A0A1D5PFD1
swissprot - R4GL41
Ensembl - ENSGALG00000004671
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ankrd27ENSDARG00000089207Danio rerio
 Q96NW4ENSG00000105186Homo sapiens
 Q3UMR0ENSMUSG00000034867Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRPA1 / Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. / O75762* / Q8BLA8* / transient receptor potential cation channel subfamily A member 1*ENSGALG0000003475114


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR003123  VPS9 domain
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035544 negative regulation of SNARE complex assembly IEA
 biological_processGO:0035646 endosome to melanosome transport IEA
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0045022 early endosome to late endosome transport IEA
 biological_processGO:0048812 neuron projection morphogenesis IEA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis IEA
 biological_processGO:1990126 retrograde transport, endosome to plasma membrane IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0097422 tubular endosome IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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