ENSDARG00000089207


Danio rerio

Features
Gene ID: ENSDARG00000089207
  
Biological name :ankrd27
  
Synonyms : ankrd27 / ankyrin repeat domain 27 (VPS9 domain)
  
Possible biological names infered from orthology : ankyrin repeat domain 27 / Ankyrin repeat domain-containing protein 27 / Q3UMR0 / Q96NW4
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 36405021
Gene end: 36437925
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000110301
Ensembl peptide - ENSDARP00000126932
swissprot - E7FAG3
swissprot - R4GEL9
ZFIN ID - ZDB-GENE-121105-1
Ensembl - ENSDARG00000089207
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ANKRD27ENSGALG00000004671Gallus gallus
 Q96NW4ENSG00000105186Homo sapiens
 Q3UMR0ENSMUSG00000034867Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpa1a / transient receptor potential cation channel, subfamily A, member 1a / TRPA1* / O75762* / Q8BLA8* / transient receptor potential cation channel subfamily A member 1*ENSDARG0000001669914
trpa1b / transient receptor potential cation channel, subfamily A, member 1b / TRPA1* / O75762* / Q8BLA8* / transient receptor potential cation channel subfamily A member 1*ENSDARG0000003187513


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR003123  VPS9 domain
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0045022 early endosome to late endosome transport IBA
 biological_processGO:1990126 retrograde transport, endosome to plasma membrane IBA
 cellular_componentGO:0005769 early endosome IBA
 cellular_componentGO:0005770 late endosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0030133 transport vesicle IBA
 cellular_componentGO:0097422 tubular endosome IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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