ENSGALG00000034751


Gallus gallus

Features
Gene ID: ENSGALG00000034751
  
Biological name :TRPA1
  
Synonyms : Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. / TRPA1
  
Possible biological names infered from orthology : O75762 / Q8BLA8 / transient receptor potential cation channel subfamily A member 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 117714320
Gene end: 117748433
  
Corresponding Affymetrix probe sets: Gga.18369.1.S1_at (Chicken Array)   GgaAffx.9959.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044736
Ensembl peptide - ENSGALP00000057043
Ensembl peptide - ENSGALP00000053618
NCBI entrez gene - 420180     See in Manteia.
RefSeq - NM_001318460
RefSeq - XM_015282879
RefSeq Peptide - NP_001305389
swissprot - A0A1D5PVR7
swissprot - A0A1D5PLA3
swissprot - A0A1D5NWJ6
Ensembl - ENSGALG00000034751
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpa1aENSDARG00000016699Danio rerio
 trpa1bENSDARG00000031875Danio rerio
 TRPA1ENSG00000104321Homo sapiens
 Trpa1ENSMUSG00000032769Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ANKRD27 / ankyrin repeat domain 27 / Q3UMR0* / Q96NW4* / Ankyrin repeat domain-containing protein 27 *ENSGALG0000000467113


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR005821  Ion transport domain
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IEA
 biological_processGO:0009409 response to cold IEA
 biological_processGO:0010033 response to organic substance IEA
 biological_processGO:0014070 response to organic cyclic compound IEA
 biological_processGO:0019233 sensory perception of pain IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0042542 response to hydrogen peroxide IEA
 biological_processGO:0048265 response to pain IEA
 biological_processGO:0050955 thermoception IEA
 biological_processGO:0050966 detection of mechanical stimulus involved in sensory perception of pain IEA
 biological_processGO:0050968 detection of chemical stimulus involved in sensory perception of pain IEA
 biological_processGO:0051289 protein homotetramerization IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032421 stereocilium bundle IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0015267 channel activity IEA
 molecular_functionGO:0015278 calcium-release channel activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0097604 temperature-gated cation channel activity IEA


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr