ENSGALG00000004825


Gallus gallus

Features
Gene ID: ENSGALG00000004825
  
Biological name :HDAC8
  
Synonyms : HDAC8 / histone deacetylase 8
  
Possible biological names infered from orthology : Q8VH37 / Q9BY41
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 1894128
Gene end: 1902643
  
Corresponding Affymetrix probe sets: Gga.11652.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055073
Ensembl peptide - ENSGALP00000063980
Ensembl peptide - ENSGALP00000062458
Ensembl peptide - ENSGALP00000061867
Ensembl peptide - ENSGALP00000060873
Ensembl peptide - ENSGALP00000059386
Ensembl peptide - ENSGALP00000059260
Ensembl peptide - ENSGALP00000058839
Ensembl peptide - ENSGALP00000058510
Ensembl peptide - ENSGALP00000007696
Ensembl peptide - ENSGALP00000043524
NCBI entrez gene - 422182     See in Manteia.
RefSeq - XM_004940604
RefSeq - XM_015278383
RefSeq - XM_420178
swissprot - A0A1L1RKV8
swissprot - A0A1L1RKH1
swissprot - A0A1D5PZU3
swissprot - A0A1L1RYP1
swissprot - A0A1D5NT71
swissprot - F1NFY6
swissprot - A0A1D5PQB1
swissprot - A0A1L1RST5
swissprot - A0A1L1RPZ9
Ensembl - ENSGALG00000004825
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hdac8ENSDARG00000003021Danio rerio
 HDAC8ENSG00000147099Homo sapiens
 Hdac8ENSMUSG00000067567Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HDAC2 / histone deacetylase 2 / Q92769*ENSGALG0000001499143
HDAC3 / histone deacetylase 3 / O15379*ENSGALG0000000263441
HDAC1 / P56517 / Histone deacetylase 1 / O09106* / Q13547* / Gm10093*ENSGALG0000000329740
HDAC11 / histone deacetylase 11 / Q91WA3* / Q96DB2*ENSGALG0000000509221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000286  Histone deacetylase family
 IPR003084  Histone deacetylase
 IPR023801  Histone deacetylase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007062 sister chromatid cohesion IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0031397 negative regulation of protein ubiquitination IEA
 biological_processGO:0031647 regulation of protein stability IEA
 biological_processGO:0032204 regulation of telomere maintenance IEA
 biological_processGO:0071922 regulation of cohesin loading IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0004407 histone deacetylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030544 Hsp70 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051879 Hsp90 protein binding IEA


Pathways (from Reactome)
Pathway description
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr