ENSGALG00000004902


Gallus gallus

Features
Gene ID: ENSGALG00000004902
  
Biological name :TOM1L2
  
Synonyms : target of myb1 like 2 membrane trafficking protein / TOM1L2
  
Possible biological names infered from orthology : Q5SRX1 / Q6ZVM7 / TOM1-like protein 2
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4948185
Gene end: 4999287
  
Corresponding Affymetrix probe sets: Gga.17220.1.S1_at (Chicken Array)   Gga.17220.2.S1_a_at (Chicken Array)   Gga.5424.1.S1_at (Chicken Array)   GgaAffx.3048.1.S1_at (Chicken Array)   GgaAffx.3048.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007825
NCBI entrez gene - 416509     See in Manteia.
RefSeq - XM_015294182
RefSeq - NM_001270967
RefSeq - XM_015294180
RefSeq - XM_015294181
RefSeq Peptide - NP_001257896
swissprot - F1NIQ4
Ensembl - ENSGALG00000004902
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tom1l2ENSDARG00000009217Danio rerio
 TOM1L2ENSDARG00000056394Danio rerio
 Q6ZVM7ENSG00000175662Homo sapiens
 Q5SRX1ENSMUSG00000000538Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TOM1 / O12940 / Target of Myb protein 1 / O60784* / O88746* / target of myb1 trafficking protein* / target of myb1 membrane trafficking protein*ENSGALG0000001255262
TOM1L1 / target of myb1 like 1 membrane trafficking protein / O75674* / Q923U0* / target of myb1-like 1 (chicken)*ENSGALG0000000301132
GGA3 / ADP-ribosylation factor-binding protein GGA3 / Q8BMI3* / Q9NZ52* / golgi associated, gamma adaptin ear containing, ARF binding protein 3*ENSGALG0000000799224
GGA1 / golgi associated, gamma adaptin ear containing, ARF binding protein 1 / Q8R0H9* / Q9UJY5* / ADP-ribosylation factor-binding protein GGA1 *ENSGALG0000003965822
GGA2 / golgi associated, gamma adaptin ear containing, ARF binding protein 2 / Q6P5E6* / Q9UJY4* / ADP-ribosylation factor-binding protein GGA2 *ENSGALG0000000614020


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008942  ENTH/VHS
 IPR014645  Target of Myb protein 1
 IPR027429  Target of Myb1-like 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0045839 negative regulation of mitotic nuclear division IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0030276 clathrin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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