ENSGALG00000039658


Gallus gallus

Features
Gene ID: ENSGALG00000039658
  
Biological name :GGA1
  
Synonyms : GGA1 / golgi associated, gamma adaptin ear containing, ARF binding protein 1
  
Possible biological names infered from orthology : ADP-ribosylation factor-binding protein GGA1 / Q8R0H9 / Q9UJY5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 51230967
Gene end: 51239478
  
Corresponding Affymetrix probe sets: GgaAffx.20577.1.S1_at (Chicken Array)   GgaAffx.20577.1.S1_s_at (Chicken Array)   GgaAffx.23903.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047458
Ensembl peptide - ENSGALP00000055669
NCBI entrez gene - 100857525     See in Manteia.
RefSeq - XM_015288433
RefSeq - XM_004949796
swissprot - A0A1D5PRZ0
swissprot - A0A1D5P452
Ensembl - ENSGALG00000039658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gga1ENSDARG00000038537Danio rerio
 GGA1ENSG00000100083Homo sapiens
 Gga1ENSMUSG00000033128Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GGA3 / ADP-ribosylation factor-binding protein GGA3 / Q8BMI3* / Q9NZ52* / golgi associated, gamma adaptin ear containing, ARF binding protein 3*ENSGALG0000000799252
GGA2 / golgi associated, gamma adaptin ear containing, ARF binding protein 2 / Q6P5E6* / Q9UJY4* / ADP-ribosylation factor-binding protein GGA2 *ENSGALG0000000614043
TOM1L2 / target of myb1 like 2 membrane trafficking protein / Q5SRX1* / Q6ZVM7* / TOM1-like protein 2 *ENSGALG0000000490217
TOM1 / O12940 / Target of Myb protein 1 / O60784* / O88746* / target of myb1 trafficking protein* / target of myb1 membrane trafficking protein*ENSGALG0000001255215
TOM1L1 / target of myb1 like 1 membrane trafficking protein / O75674* / Q923U0* / target of myb1-like 1 (chicken)*ENSGALG0000000301112


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008152  Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
 IPR008153  Gamma-adaptin ear (GAE) domain
 IPR008942  ENTH/VHS
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 biological_processGO:1901998 toxin transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0030306 ADP-ribosylation factor binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000021611 Q9JM13* / Q9UJ41* / RABGEF1* / AC027644.4* / Rab5 GDP/GTP exchange factor * / RAB guanine nucleotide exchange factor 1*  / complex
 ENSGALG00000003359 RAB5C / Q98932 / Ras-related protein Rab-5C / P51148* / P35278* / RAB5C, member RAS oncogene family*  / complex
 ENSGALG00000011272 RAB5A / RAB5A, member RAS oncogene family / P20339* / Q9CQD1* / Ras-related protein Rab-5A *  / complex
 ENSGALG00000042482 RAB5B / ras-related protein Rab-5B / P61020* / P61021* / RAB5B, member RAS oncogene family*  / complex
 ENSGALG00000039221 A6NDS4* / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / TBC1D3F* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1D3B* / ...  / complex / reaction






 

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