ENSGALG00000007992


Gallus gallus

Features
Gene ID: ENSGALG00000007992
  
Biological name :GGA3
  
Synonyms : ADP-ribosylation factor-binding protein GGA3 / GGA3
  
Possible biological names infered from orthology : golgi associated, gamma adaptin ear containing, ARF binding protein 3 / Q8BMI3 / Q9NZ52
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 10795225
Gene end: 10814127
  
Corresponding Affymetrix probe sets: GgaAffx.5005.1.S1_s_at (Chicken Array)   GgaAffx.5005.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012961
NCBI entrez gene - 422121     See in Manteia.
RefSeq - NM_001031108
RefSeq - XM_015295403
RefSeq - XM_015295404
RefSeq Peptide - NP_001026279
swissprot - F1NRR5
Ensembl - ENSGALG00000007992
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gga3ENSDARG00000103667Danio rerio
 GGA3 (1 of many)ENSDARG00000098871Danio rerio
 GGA3ENSG00000125447Homo sapiens
 Gga3ENSMUSG00000020740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GGA1 / golgi associated, gamma adaptin ear containing, ARF binding protein 1 / Q8R0H9* / Q9UJY5* / ADP-ribosylation factor-binding protein GGA1 *ENSGALG0000003965847
GGA2 / golgi associated, gamma adaptin ear containing, ARF binding protein 2 / Q6P5E6* / Q9UJY4* / ADP-ribosylation factor-binding protein GGA2 *ENSGALG0000000614036
TOM1L2 / target of myb1 like 2 membrane trafficking protein / Q5SRX1* / Q6ZVM7* / TOM1-like protein 2 *ENSGALG0000000490216
TOM1 / O12940 / Target of Myb protein 1 / O60784* / O88746* / target of myb1 trafficking protein* / target of myb1 membrane trafficking protein*ENSGALG0000001255215
TOM1L1 / target of myb1 like 1 membrane trafficking protein / O75674* / Q923U0* / target of myb1-like 1 (chicken)*ENSGALG0000000301111


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008152  Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
 IPR008153  Gamma-adaptin ear (GAE) domain
 IPR008942  ENTH/VHS
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR027422  ADP-ribosylation factor-binding protein GGA3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 molecular_functionGO:0030306 ADP-ribosylation factor binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs
MET receptor recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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