ENSGALG00000039221


Gallus gallus

Features
Gene ID: ENSGALG00000039221
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : A0A087WVF3 / A0A087WXS9 / A0A087X179 / A0A087X1G2 / A6NDS4 / B9A6J9 / P0C7X1 / Q2M2D7 / Q6DHY5 / Q6IPX1 / Q86UD7 / Q8IZP1 / TBC1D26 / TBC1D28 / TBC1D3 / TBC1D3B / TBC1D3C / TBC1D3D / TBC1D3E / TBC1D3F / TBC1D3G / TBC1D3H / TBC1D3I / TBC1D3K / TBC1D3L / TBC1 domain family member 26 / TBC1 domain family member 28 / TBC1 domain family member 3 / TBC1 domain family member 3B / TBC1 domain family member 3C / TBC1 domain family member 3D / TBC1 domain family member 3E / TBC1 domain family member 3F / TBC1 domain family member 3G / TBC1 domain family member 3H / TBC1 domain family member 3I / TBC1 domain family member 3K / TBC1 domain family member 3L
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 16094708
Gene end: 16111802
  
Corresponding Affymetrix probe sets: Gga.19016.1.S1_s_at (Chicken Array)   GgaAffx.11481.1.S1_s_at (Chicken Array)   GgaAffx.4313.1.S1_at (Chicken Array)   GgaAffx.7913.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050890
NCBI entrez gene - 423110     See in Manteia.
RefSeq - XM_015286812
RefSeq - XM_015286813
RefSeq - XM_015286814
RefSeq - XM_015286815
RefSeq - XM_015286816
RefSeq - XM_015286817
RefSeq - XM_015286818
RefSeq - XM_015286819
RefSeq - XM_015286811
swissprot - A0A1D5PDP5
Ensembl - ENSGALG00000039221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-288d18.1ENSDARG00000011088Danio rerio
 si:dkeyp-19e1.3ENSDARG00000051836Danio rerio
 A6NDS4ENSG00000274808Homo sapiens
 B9A6J9ENSG00000274512Homo sapiens
 P0C7X1ENSG00000274226Homo sapiens
 Q2M2D7ENSG00000189375Homo sapiens
 Q6DHY5ENSG00000260287Homo sapiens
 Q6IPX1ENSG00000278299Homo sapiens
 Q86UD7ENSG00000214946Homo sapiens
 Q8IZP1ENSG00000274611Homo sapiens
 TBC1D3DENSG00000274419Homo sapiens
 TBC1D3EENSG00000278599Homo sapiens
 TBC1D3FENSG00000275954Homo sapiens
 TBC1D3IENSG00000274933Homo sapiens
 TBC1D3KENSG00000273513Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP6NL / USP6 N-terminal-like protein / Q80XC3* / Q92738* / USP6 N-terminal like*ENSGALG0000003556339
P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSGALG0000000795414
GRTP1 / growth hormone regulated TBC protein 1 / Q5TC63* / Q9D3N8*ENSGALG0000001682810


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000039658 GGA1 / golgi associated, gamma adaptin ear containing, ARF binding protein 1 / Q8R0H9* / Q9UJY5* / ADP-ribosylation factor-binding protein GGA1 *  / complex / reaction
 ENSGALG00000042482 RAB5B / ras-related protein Rab-5B / P61020* / P61021* / RAB5B, member RAS oncogene family*  / reaction / complex
 ENSGALG00000021611 Q9JM13* / Q9UJ41* / RABGEF1* / AC027644.4* / Rab5 GDP/GTP exchange factor * / RAB guanine nucleotide exchange factor 1*  / reaction / complex
 ENSGALG00000003359 RAB5C / Q98932 / Ras-related protein Rab-5C / P51148* / P35278* / RAB5C, member RAS oncogene family*  / complex / reaction
 ENSGALG00000011272 RAB5A / RAB5A, member RAS oncogene family / P20339* / Q9CQD1* / Ras-related protein Rab-5A *  / complex / reaction
 ENSGALG00000006140 GGA2 / golgi associated, gamma adaptin ear containing, ARF binding protein 2 / Q6P5E6* / Q9UJY4* / ADP-ribosylation factor-binding protein GGA2 *  / reaction / complex






 

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