ENSG00000189375


Homo sapiens

Features
Gene ID: ENSG00000189375
  
Biological name :TBC1D28
  
Synonyms : Q2M2D7 / TBC1D28 / TBC1 domain family member 28
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p11.2
Gene start: 18635006
Gene end: 18661950
  
Corresponding Affymetrix probe sets: 233462_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458676
Ensembl peptide - ENSP00000339973
Ensembl peptide - ENSP00000385821
Ensembl peptide - ENSP00000461684
Ensembl peptide - ENSP00000460935
Ensembl peptide - ENSP00000461503
NCBI entrez gene - 254272     See in Manteia.
RefSeq - XM_017024422
RefSeq - XM_017024416
RefSeq - XM_017024417
RefSeq - XM_017024418
RefSeq - XM_017024419
RefSeq - XM_017024420
RefSeq - XM_017024421
RefSeq - NM_001039397
RefSeq - XM_011523781
RefSeq - XM_011523782
RefSeq - XM_011523783
RefSeq Peptide - NP_001034486
swissprot - I3L433
swissprot - I3L4T3
swissprot - I3L502
swissprot - I3L197
swissprot - Q2M2D7
Ensembl - ENSG00000189375
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-288d18.1ENSDARG00000011088Danio rerio
 si:dkeyp-19e1.3ENSDARG00000051836Danio rerio
 ENSGALG00000039221Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86UD7 / TBC1D26 / TBC1 domain family member 26ENSG0000021494689
Q6DHY5 / TBC1D3G / TBC1 domain family member 3GENSG0000026028746
A6NDS4 / TBC1D3B / TBC1 domain family member 3BENSG0000027480846
TBC1D3F / TBC1 domain family member 3FENSG0000027595446
Q8IZP1 / TBC1D3 / TBC1 domain family member 3ENSG0000027461145
Q6IPX1 / TBC1D3C / TBC1 domain family member 3CENSG0000027829945
P0C7X1 / TBC1D3H / TBC1 domain family member 3HENSG0000027422645
TBC1D3K / A0A087X1G2 / TBC1 domain family member 3KENSG0000027351345
TBC1D3I / A0A087WXS9 / TBC1 domain family member 3IENSG0000027493345
B9A6J9 / TBC1D3L / TBC1 domain family member 3LENSG0000027451245
TBC1D3D / A0A087WVF3 / TBC1 domain family member 3DENSG0000027441945
TBC1D3E / A0A087X179 / TBC1 domain family member 3EENSG0000027859944
Q92738 / USP6NL / USP6 N-terminal likeENSG0000014842936
Q9BXI6 / TBC1D10A / TBC1 domain family member 10AENSG0000009999223
Q4KMP7 / TBC1D10B / TBC1 domain family member 10BENSG0000016922122
Q8IV04 / TBC1D10C / TBC1 domain family member 10CENSG0000017546319
GRTP1 / Q5TC63 / growth hormone regulated TBC protein 1ENSG0000013983517
AC004997.1ENSG0000024875110


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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