ENSG00000139835


Homo sapiens

Features
Gene ID: ENSG00000139835
  
Biological name :GRTP1
  
Synonyms : growth hormone regulated TBC protein 1 / GRTP1 / Q5TC63
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q34
Gene start: 113324164
Gene end: 113364148
  
Corresponding Affymetrix probe sets: 206712_at (Human Genome U133 Plus 2.0 Array)   229377_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483734
Ensembl peptide - ENSP00000321850
Ensembl peptide - ENSP00000364579
Ensembl peptide - ENSP00000364580
NCBI entrez gene - 79774     See in Manteia.
RefSeq - XM_017020756
RefSeq - NM_001286732
RefSeq - NM_001286733
RefSeq - NM_024719
RefSeq - XM_005268333
RefSeq - XM_011537521
RefSeq - XM_011537522
RefSeq - XM_017020755
RefSeq Peptide - NP_001273661
RefSeq Peptide - NP_001273662
RefSeq Peptide - NP_078995
swissprot - A0A087X0Y1
swissprot - Q5TC63
Ensembl - ENSG00000139835
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grtp1aENSDARG00000029936Danio rerio
 grtp1bENSDARG00000030269Danio rerio
 GRTP1ENSGALG00000016828Gallus gallus
 Grtp1ENSMUSG00000038515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IV04 / TBC1D10C / TBC1 domain family member 10CENSG0000017546329
Q9BXI6 / TBC1D10A / TBC1 domain family member 10AENSG0000009999227
Q4KMP7 / TBC1D10B / TBC1 domain family member 10BENSG0000016922126
Q92738 / USP6NL / USP6 N-terminal likeENSG0000014842922
AC004997.1ENSG0000024875120
Q6IPX1 / TBC1D3C / TBC1 domain family member 3CENSG0000027829919
TBC1D3F / TBC1 domain family member 3FENSG0000027595419
TBC1D3D / A0A087WVF3 / TBC1 domain family member 3DENSG0000027441919
B9A6J9 / TBC1D3L / TBC1 domain family member 3LENSG0000027451219
Q8IZP1 / TBC1D3 / TBC1 domain family member 3ENSG0000027461119
P0C7X1 / TBC1D3H / TBC1 domain family member 3HENSG0000027422619
Q6DHY5 / TBC1D3G / TBC1 domain family member 3GENSG0000026028719
TBC1D3I / A0A087WXS9 / TBC1 domain family member 3IENSG0000027493319
TBC1D3K / A0A087X1G2 / TBC1 domain family member 3KENSG0000027351318
A6NDS4 / TBC1D3B / TBC1 domain family member 3BENSG0000027480818
TBC1D3E / A0A087X179 / TBC1 domain family member 3EENSG0000027859918
Q86UD7 / TBC1D26 / TBC1 domain family member 26ENSG0000021494613
Q2M2D7 / TBC1D28 / TBC1 domain family member 28ENSG0000018937510


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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