ENSDARG00000030269


Danio rerio

Features
Gene ID: ENSDARG00000030269
  
Biological name :grtp1b
  
Synonyms : growth hormone regulated TBC protein 1b / grtp1b
  
Possible biological names infered from orthology : growth hormone regulated TBC protein 1 / GRTP1 / Q5TC63 / Q9D3N8
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 34389976
Gene end: 34396264
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000045753
NCBI entrez gene - 550508     See in Manteia.
RefSeq - NM_001017810
RefSeq Peptide - NP_001017810
swissprot - F1Q9A1
ZFIN ID - ZDB-GENE-050417-346
Ensembl - ENSDARG00000030269
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GRTP1ENSGALG00000016828Gallus gallus
 GRTP1ENSG00000139835Homo sapiens
 Grtp1ENSMUSG00000038515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
grtp1a / growth hormone regulated TBC protein 1a / GRTP1* / Q5TC63* / growth hormone regulated TBC protein 1*ENSDARG0000002993666
tbc1d10ab / TBC1 domain family, member 10Ab / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000006009627
tbc1d10b / TBC1 domain family, member 10b / Q4KMP7* / Q8BHL3*ENSDARG0000007860427
tbc1d10c / TBC1 domain family, member 10C / Q8C9V1* / Q8IV04* / Carabin *ENSDARG0000003740825
tbc1d10aa / TBC1 domain family, member 10Aa / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000010207025
si:ch211-266k8.4ENSDARG0000008684022
usp6nl / USP6 N-terminal like / Q80XC3* / Q92738*ENSDARG0000002218722
si:ch211-288d18.1 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TB...ENSDARG0000001108821
si:dkeyp-19e1.3 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1...ENSDARG0000005183619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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