ENSDARG00000037408


Danio rerio

Features
Gene ID: ENSDARG00000037408
  
Biological name :tbc1d10c
  
Synonyms : tbc1d10c / TBC1 domain family, member 10C
  
Possible biological names infered from orthology : Carabin / Q8C9V1 / Q8IV04
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 21905492
Gene end: 21923281
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000054436
NCBI entrez gene - 101887140     See in Manteia.
RefSeq - XM_005173146
RefSeq - XM_021472775
swissprot - E7F6L2
ZFIN ID - ZDB-GENE-130125-1
Ensembl - ENSDARG00000037408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8IV04ENSG00000175463Homo sapiens
 Q8C9V1ENSMUSG00000040247Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d10b / TBC1 domain family, member 10b / Q4KMP7* / Q8BHL3*ENSDARG0000007860414
tbc1d10ab / TBC1 domain family, member 10Ab / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000006009612
tbc1d10aa / TBC1 domain family, member 10Aa / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000010207011
usp6nl / USP6 N-terminal like / Q80XC3* / Q92738*ENSDARG000000221878
si:dkeyp-19e1.3 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1...ENSDARG000000518368
si:ch211-288d18.1 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TB...ENSDARG000000110887
grtp1b / growth hormone regulated TBC protein 1b / GRTP1* / Q5TC63* / Q9D3N8* / growth hormone regulated TBC protein 1*ENSDARG000000302696
si:ch211-266k8.4ENSDARG000000868406
grtp1a / growth hormone regulated TBC protein 1a / GRTP1* / Q5TC63* / growth hormone regulated TBC protein 1*ENSDARG000000299366


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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