ENSDARG00000086840


Danio rerio

Features
Gene ID: ENSDARG00000086840
  
Biological name :si:ch211-266k8.4
  
Synonyms : si:ch211-266k8.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 16467860
Gene end: 16552135
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104507
NCBI entrez gene - 559362     See in Manteia.
RefSeq - XM_682696
swissprot - E7EZ23
ZFIN ID - ZDB-GENE-131121-469
Ensembl - ENSDARG00000086840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp6nl / USP6 N-terminal like / Q80XC3* / Q92738*ENSDARG0000002218720
si:ch211-288d18.1 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TB...ENSDARG0000001108818
si:dkeyp-19e1.3 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1...ENSDARG0000005183616
tbc1d10ab / TBC1 domain family, member 10Ab / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000006009616
tbc1d10b / TBC1 domain family, member 10b / Q4KMP7* / Q8BHL3*ENSDARG0000007860416
tbc1d10aa / TBC1 domain family, member 10Aa / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000010207015
tbc1d10c / TBC1 domain family, member 10C / Q8C9V1* / Q8IV04* / Carabin *ENSDARG0000003740814
grtp1b / growth hormone regulated TBC protein 1b / GRTP1* / Q5TC63* / Q9D3N8* / growth hormone regulated TBC protein 1*ENSDARG0000003026913
grtp1a / growth hormone regulated TBC protein 1a / GRTP1* / Q5TC63* / growth hormone regulated TBC protein 1*ENSDARG0000002993612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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