ENSDARG00000060096


Danio rerio

Features
Gene ID: ENSDARG00000060096
  
Biological name :tbc1d10ab
  
Synonyms : tbc1d10ab / TBC1 domain family, member 10Ab
  
Possible biological names infered from orthology : AC004997.1 / P58802 / Q9BXI6 / TBC1D10A / TBC1 domain family member 10A
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 8534750
Gene end: 8576218
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000152933
Ensembl peptide - ENSDARP00000078788
Ensembl peptide - ENSDARP00000120518
Ensembl peptide - ENSDARP00000145085
Ensembl peptide - ENSDARP00000145594
swissprot - B8A5W2
swissprot - F1Q602
ZFIN ID - ZDB-GENE-081105-145
Ensembl - ENSDARG00000060096
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000007954Gallus gallus
 AC004997.1ENSG00000248751Homo sapiens
 Q9BXI6ENSG00000099992Homo sapiens
 P58802ENSMUSG00000034412Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d10aa / TBC1 domain family, member 10Aa / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000010207062
tbc1d10b / TBC1 domain family, member 10b / Q4KMP7* / Q8BHL3*ENSDARG0000007860454
tbc1d10c / TBC1 domain family, member 10C / Q8C9V1* / Q8IV04* / Carabin *ENSDARG0000003740835
si:ch211-288d18.1 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TB...ENSDARG0000001108822
si:dkeyp-19e1.3 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1...ENSDARG0000005183622
usp6nl / USP6 N-terminal like / Q80XC3* / Q92738*ENSDARG0000002218721
si:ch211-266k8.4ENSDARG0000008684021
grtp1b / growth hormone regulated TBC protein 1b / GRTP1* / Q5TC63* / Q9D3N8* / growth hormone regulated TBC protein 1*ENSDARG0000003026920
grtp1a / growth hormone regulated TBC protein 1a / GRTP1* / Q5TC63* / growth hormone regulated TBC protein 1*ENSDARG0000002993619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000052928 arf6b / ADP-ribosylation factor 6b / ARF6* / P62330* / P62331* / ADP ribosylation factor 6*  / reaction / complex
 ENSDARG00000070094 sytl1 / synaptotagmin-like 1 / Q8IYJ3*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr