ENSDARG00000070094


Danio rerio

Features
Gene ID: ENSDARG00000070094
  
Biological name :sytl1
  
Synonyms : synaptotagmin-like 1 / sytl1
  
Possible biological names infered from orthology : Q8IYJ3
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 42573724
Gene end: 42588510
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000093359
NCBI entrez gene - 777759     See in Manteia.
RefSeq - NM_001128533
RefSeq Peptide - NP_001122005
swissprot - Q1L8P2
ZFIN ID - ZDB-GENE-060503-439
Ensembl - ENSDARG00000070094
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYTL1ENSG00000142765Homo sapiens
 Sytl1ENSMUSG00000028860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-266g18.6ENSDARG0000000338137
sytl2b / synaptotagmin-like 2b / SYTL2* / Q9HCH5* / Q99N50* / synaptotagmin like 2* / Synaptotagmin-like protein 2 *ENSDARG0000007543635
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213531
sytl4 / synaptotagmin-like 4 / Q96C24* / Q9R0Q1*ENSDARG0000010243330
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195624
sytl3 / synaptotagmin-like 3 / Q4VX76* / Q99N48* / Synaptotagmin-like protein 3 *ENSDARG0000004346820
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG0000008829318
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG0000010549017
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG0000007873616
doc2d / double C2-like domains, delta / Doc2g*ENSDARG0000007996215
rph3aa / rabphilin 3A homolog (mouse), a / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000000634364


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR028378  Synaptotagmin-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060096 tbc1d10ab / TBC1 domain family, member 10Ab / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*  / complex / reaction






 

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