ENSDARG00000102433


Danio rerio

Features
Gene ID: ENSDARG00000102433
  
Biological name :sytl4
  
Synonyms : synaptotagmin-like 4 / sytl4
  
Possible biological names infered from orthology : Q96C24 / Q9R0Q1
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 35424539
Gene end: 35441425
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132181
Ensembl peptide - ENSDARP00000139895
Ensembl peptide - ENSDARP00000131524
NCBI entrez gene - 553322     See in Manteia.
RefSeq - NM_001080988
RefSeq Peptide - NP_001074457
swissprot - A0A0R4IEN4
swissprot - F1QIG1
ZFIN ID - ZDB-GENE-070209-217
Ensembl - ENSDARG00000102433
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYTL4ENSGALG00000006786Gallus gallus
 SYTL4ENSG00000102362Homo sapiens
 Sytl4ENSMUSG00000031255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213536
si:ch211-266g18.6ENSDARG0000000338127
sytl2b / synaptotagmin-like 2b / SYTL2* / Q9HCH5* / Q99N50* / synaptotagmin like 2* / Synaptotagmin-like protein 2 *ENSDARG0000007543625
sytl1 / synaptotagmin-like 1 / Q8IYJ3*ENSDARG0000007009424
sytl3 / synaptotagmin-like 3 / Q4VX76* / Q99N48* / Synaptotagmin-like protein 3 *ENSDARG0000004346819
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG0000010549019
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195617
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG0000008829317
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG0000007873615
doc2d / double C2-like domains, delta / Doc2g*ENSDARG0000007996215
rph3aa / rabphilin 3A homolog (mouse), a / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000000634365


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR028694  Synaptotagmin-like protein 4
 IPR028702  Synaptotagmin-like protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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