ENSDARG00000063436


Danio rerio

Features
Gene ID: ENSDARG00000063436
  
Biological name :rph3aa
  
Synonyms : rabphilin 3A homolog (mouse), a / rph3aa
  
Possible biological names infered from orthology : P47708 / Q9Y2J0 / rabphilin 3A / RPH3A
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 3507861
Gene end: 3510876
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087116
swissprot - E7FEI1
ZFIN ID - ZDB-GENE-090706-2
Ensembl - ENSDARG00000063436
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPH3AENSGALG00000004840Gallus gallus
 RPH3AENSG00000089169Homo sapiens
 Rph3aENSMUSG00000029608Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG0000010549087
doc2d / double C2-like domains, delta / Doc2g*ENSDARG0000007996272
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG0000008829370
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG0000007873659
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213531
sytl4 / synaptotagmin-like 4 / Q96C24* / Q9R0Q1*ENSDARG0000010243330
si:ch211-266g18.6ENSDARG0000000338127
sytl2b / synaptotagmin-like 2b / SYTL2* / Q9HCH5* / Q99N50* / synaptotagmin like 2* / Synaptotagmin-like protein 2 *ENSDARG0000007543627
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195626
sytl1 / synaptotagmin-like 1 / Q8IYJ3*ENSDARG0000007009418
sytl3 / synaptotagmin-like 3 / Q4VX76* / Q99N48* / Synaptotagmin-like protein 3 *ENSDARG0000004346813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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