ENSDARG00000075436


Danio rerio

Features
Gene ID: ENSDARG00000075436
  
Biological name :sytl2b
  
Synonyms : synaptotagmin-like 2b / sytl2b
  
Possible biological names infered from orthology : Q99N50 / Q9HCH5 / synaptotagmin like 2 / Synaptotagmin-like protein 2 / SYTL2
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 19697246
Gene end: 19724932
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000047642
Ensembl peptide - ENSDARP00000126784
NCBI entrez gene - 572466     See in Manteia.
RefSeq - XM_696185
swissprot - F1QQ65
swissprot - R4GE71
ZFIN ID - ZDB-GENE-121214-363
Ensembl - ENSDARG00000075436
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000008326Gallus gallus
 SYTL2ENSG00000137501Homo sapiens
 Sytl2ENSMUSG00000030616Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-266g18.6ENSDARG0000000338114
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195611
sytl1 / synaptotagmin-like 1 / Q8IYJ3*ENSDARG0000007009411
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213510
sytl4 / synaptotagmin-like 4 / Q96C24* / Q9R0Q1*ENSDARG0000010243310
sytl3 / synaptotagmin-like 3 / Q4VX76* / Q99N48* / Synaptotagmin-like protein 3 *ENSDARG000000434687
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000001054906
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG000000882936
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG000000787365
doc2d / double C2-like domains, delta / Doc2g*ENSDARG000000799625
rph3aa / rabphilin 3A homolog (mouse), a / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000000634362


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR027006  Synaptotagmin-like protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0070382 exocytic vesicle IBA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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