ENSGALG00000005230


Gallus gallus

Features
Gene ID: ENSGALG00000005230
  
Biological name :MED13
  
Synonyms : MED13 / mediator complex subunit 13
  
Possible biological names infered from orthology : Mediator of RNA polymerase II transcription subunit 13 / Q5SWW4 / Q9UHV7
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 7427778
Gene end: 7474251
  
Corresponding Affymetrix probe sets: Gga.19390.1.S1_at (Chicken Array)   Gga.19390.1.S1_s_at (Chicken Array)   GgaAffx.26454.1.S1_at (Chicken Array)   GgaAffx.3274.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008391
NCBI entrez gene - 417639     See in Manteia.
RefSeq - XM_004946720
RefSeq - XM_004946721
RefSeq - XM_004946722
swissprot - F1P413
Ensembl - ENSGALG00000005230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med13aENSDARG00000053884Danio rerio
 med13bENSDARG00000003910Danio rerio
 MED13ENSG00000108510Homo sapiens
 Med13ENSMUSG00000034297Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MED13L / mediator complex subunit 13 like / Q71F56* / mediator of RNA polymerase II transcription subunit 13-like isoform 1 *ENSGALG0000000823852


Protein motifs (from Interpro)
Interpro ID Name
 IPR009401  Mediator complex, subunit Med13
 IPR021643  Mediator complex, subunit Med13, N-terminal, metazoa/fungi


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway IEA
 biological_processGO:0030521 androgen receptor signaling pathway IEA
 biological_processGO:0042632 cholesterol homeostasis IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0070328 triglyceride homeostasis IEA
 biological_processGO:1904168 negative regulation of thyroid hormone receptor activity IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IBA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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