ENSGALG00000005277


Gallus gallus

Features
Gene ID: ENSGALG00000005277
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : O00442 / Q9D7H3 / RNA 3-terminal phosphate cyclase / RTCA
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 11881946
Gene end: 11884390
  
Corresponding Affymetrix probe sets: Gga.9061.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008450
swissprot - E1C1Y0
Ensembl - ENSGALG00000005277
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rtcaENSDARG00000002215Danio rerio
 RTCAENSG00000137996Homo sapiens
 RtcaENSMUSG00000000339Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCL1 / RNA terminal phosphate cyclase like 1 / Q9JJT0* / Q9Y2P8* / RNA 3-terminal phosphate cyclase-like protein *ENSGALG0000001502419
RTCA* / O00442* / Q9D7H3* / RNA 3-terminal phosphate cyclase*ENSGALG000000451290


Protein motifs (from Interpro)
Interpro ID Name
 IPR000228  RNA 3"-terminal phosphate cyclase
 IPR013791  RNA 3"-terminal phosphate cyclase, insert domain
 IPR013792  RNA 3"-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
 IPR017770  RNA 3"-terminal phosphate cyclase type 1
 IPR023797  RNA 3"-terminal phosphate cyclase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003963 RNA-3"-phosphate cyclase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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