ENSGALG00000005739


Gallus gallus

Features
Gene ID: ENSGALG00000005739
  
Biological name :SCD
  
Synonyms : acyl-CoA desaturase / SCD
  
Possible biological names infered from orthology : Acyl-CoA desaturase 3 / Acyl-CoA desaturase 4 / O00767 / P13011 / P13516 / Q6T707 / Q99PL7 / Scd1 / Scd2 / Scd3 / Scd4 / stearoyl-CoA desaturase / stearoyl-Coenzyme A desaturase 1 / stearoyl-Coenzyme A desaturase 2
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 17493789
Gene end: 17509405
  
Corresponding Affymetrix probe sets: Gga.17055.1.S1_at (Chicken Array)   Gga.17055.1.S2_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050361
Ensembl peptide - ENSGALP00000009207
NCBI entrez gene - 395706     See in Manteia.
RefSeq - NM_204890
RefSeq Peptide - NP_990221
swissprot - F1N8F0
swissprot - A0A1D5PC75
Ensembl - ENSGALG00000005739
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scdENSDARG00000033662Danio rerio
 scdbENSDARG00000030265Danio rerio
 SCDENSG00000099194Homo sapiens
 Scd1ENSMUSG00000037071Mus musculus
 Scd2ENSMUSG00000025203Mus musculus
 Scd3ENSMUSG00000025202Mus musculus
 Scd4ENSMUSG00000050195Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCD5 / stearoyl-CoA desaturase 5 / Q86SK9*ENSGALG0000003450257


Protein motifs (from Interpro)
Interpro ID Name
 IPR001522  Fatty acid desaturase type 1, conserved site
 IPR005804  Fatty acid desaturase domain
 IPR015876  Acyl-CoA desaturase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006636 unsaturated fatty acid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1903966 monounsaturated fatty acid biosynthetic process IBA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004768 stearoyl-CoA 9-desaturase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA


Pathways (from Reactome)
Pathway description
Fatty acyl-CoA biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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