ENSDARG00000033662


Danio rerio

Features
Gene ID: ENSDARG00000033662
  
Biological name :scd
  
Synonyms : scd / stearoyl-CoA desaturase (delta-9-desaturase)
  
Possible biological names infered from orthology : Acyl-CoA desaturase 3 / Acyl-CoA desaturase 4 / O00767 / P13011 / P13516 / Q6T707 / Q99PL7 / Scd1 / Scd2 / Scd3 / Scd4 / stearoyl-CoA desaturase / stearoyl-Coenzyme A desaturase 1 / stearoyl-Coenzyme A desaturase 2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 48390715
Gene end: 48404672
  
Corresponding Affymetrix probe sets: Dr.12321.1.A1_at (Zebrafish Array)   Dr.21067.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124185
Ensembl peptide - ENSDARP00000146632
NCBI entrez gene - 386661     See in Manteia.
swissprot - F1QG70
ZFIN ID - ZDB-GENE-031106-3
Ensembl - ENSDARG00000033662
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCDENSGALG00000005739Gallus gallus
 SCDENSG00000099194Homo sapiens
 Scd1ENSMUSG00000037071Mus musculus
 Scd2ENSMUSG00000025203Mus musculus
 Scd3ENSMUSG00000025202Mus musculus
 Scd4ENSMUSG00000050195Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scdb / stearoyl-CoA desaturase b / SCD* / Scd4* / Scd1* / Scd2* / Scd3* / P13011* / O00767* / P13516* / Q6T707* / Q99PL7* / Acyl-CoA desaturase 3 * / Acyl-CoA desaturase 4 * / stearoyl-CoA ...ENSDARG0000003026568


Protein motifs (from Interpro)
Interpro ID Name
 IPR001522  Fatty acid desaturase type 1, conserved site
 IPR005804  Fatty acid desaturase domain
 IPR015876  Acyl-CoA desaturase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1903966 monounsaturated fatty acid biosynthetic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA


Pathways (from Reactome)
Pathway description
Fatty acyl-CoA biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000030265 scdb / stearoyl-CoA desaturase b / SCD* / Scd4* / Scd1* / Scd2* / Scd3* / P13011* / O00767* / P13516* / Q6T707* / Q99PL7* / Acyl-CoA desaturase 3 * / Acyl-CoA desaturase 4 * / stearoyl-CoA ...  / complex
 ENSDARG00000033662 scd / stearoyl-CoA desaturase (delta-9-desaturase) / Scd4* / Scd1* / Scd2* / Scd3* / Q99PL7* / O00767* / P13011* / P13516* / Q6T707* / Acyl-CoA desaturase 3 * / Acyl-CoA desaturase 4 * / st...  / complex






 

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