ENSGALG00000006101


Gallus gallus

Features
Gene ID: ENSGALG00000006101
  
Biological name :ARFRP1
  
Synonyms : ADP ribosylation factor related protein 1 / ARFRP1
  
Possible biological names infered from orthology : Q13795 / Q8BXL7
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 9829353
Gene end: 9839972
  
Corresponding Affymetrix probe sets: Gga.2599.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009835
NCBI entrez gene - 419261     See in Manteia.
RefSeq - XM_004947129
RefSeq - XM_417433
swissprot - E1C1J0
Ensembl - ENSGALG00000006101
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arfrp1ENSDARG00000057857Danio rerio
 ARFRP1ENSG00000101246Homo sapiens
 Arfrp1ENSMUSG00000038671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARL13B / ADP ribosylation factor like GTPase 13B / Q3SXY8* / Q640N2* / ADP-ribosylation factor-like protein 13B *ENSGALG0000001541231
ARL13A / ADP ribosylation factor like GTPase 13A / Q5H913* / Q9D416* / ADP-ribosylation factor-like protein 13A *ENSGALG0000000663621


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003929 SYS1 / Q78S06* / Q8N2H4* / Gm20458* / SYS1-DBNDD2* / SYS1, golgi trafficking protein* / SYS1-DBNDD2 readthrough (NMD candidate)* / SYS1 Golgi-localized integral membrane protein homolog (S....  / reaction / complex
 ENSGALG00000011651 ARL1 / ADP ribosylation factor like GTPase 1 / P40616* / P61211* / ADP-ribosylation factor-like protein 1 *  / reaction / complex






 

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