ENSG00000101246


Homo sapiens

Features
Gene ID: ENSG00000101246
  
Biological name :ARFRP1
  
Synonyms : ADP ribosylation factor related protein 1 / ARFRP1 / Q13795
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.33
Gene start: 63698642
Gene end: 63708025
  
Corresponding Affymetrix probe sets: 203174_s_at (Human Genome U133 Plus 2.0 Array)   215984_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000484109
Ensembl peptide - ENSP00000476756
Ensembl peptide - ENSP00000479058
Ensembl peptide - ENSP00000479616
Ensembl peptide - ENSP00000479940
Ensembl peptide - ENSP00000481446
Ensembl peptide - ENSP00000483130
Ensembl peptide - ENSP00000483486
NCBI entrez gene - 10139     See in Manteia.
OMIM - 604699
RefSeq - XM_017027576
RefSeq - NM_001134758
RefSeq - NM_001267544
RefSeq - NM_001267545
RefSeq - NM_001267546
RefSeq - NM_001267547
RefSeq - NM_001267548
RefSeq - NM_001267549
RefSeq - NM_003224
RefSeq - XM_011528482
RefSeq - XM_011528483
RefSeq Peptide - NP_001254474
RefSeq Peptide - NP_001254476
RefSeq Peptide - NP_001254477
RefSeq Peptide - NP_001254478
RefSeq Peptide - NP_003215
RefSeq Peptide - NP_001254475
RefSeq Peptide - NP_001128230
RefSeq Peptide - NP_001254473
swissprot - Q13795
Ensembl - ENSG00000101246
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arfrp1ENSDARG00000057857Danio rerio
 ARFRP1ENSGALG00000006101Gallus gallus
 Arfrp1ENSMUSG00000038671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARL13B / Q3SXY8 / ADP ribosylation factor like GTPase 13BENSG0000016937930
ARL13A / Q5H913 / ADP ribosylation factor like GTPase 13AENSG0000017422527


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IMP
 biological_processGO:0042147 retrograde transport, endosome to Golgi IMP
 biological_processGO:0043001 Golgi to plasma membrane protein transport IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000204070 SYS1 / Q8N2H4 / SYS1, golgi trafficking protein  / complex / reaction
 ENSG00000139977 NAA30 / Q147X3 / N(alpha)-acetyltransferase 30, NatC catalytic subunit  / reaction
 ENSG00000183011 NAA38 / Q9BRA0 / N(alpha)-acetyltransferase 38, NatC auxiliary subunit  / reaction
 ENSG00000135040 NAA35 / Q5VZE5 / N(alpha)-acetyltransferase 35, NatC auxiliary subunit  / reaction
 ENSG00000120805 ARL1 / P40616 / ADP ribosylation factor like GTPase 1  / complex / reaction






 

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