ENSDARG00000057857


Danio rerio

Features
Gene ID: ENSDARG00000057857
  
Biological name :arfrp1
  
Synonyms : ADP-ribosylation factor related protein 1 / arfrp1
  
Possible biological names infered from orthology : Q13795 / Q8BXL7
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 58522557
Gene end: 58531664
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109919
Ensembl peptide - ENSDARP00000129349
NCBI entrez gene - 503602     See in Manteia.
swissprot - E7FAS3
swissprot - Q5EAS5
ZFIN ID - ZDB-GENE-050227-14
Ensembl - ENSDARG00000057857
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARFRP1ENSGALG00000006101Gallus gallus
 ARFRP1ENSG00000101246Homo sapiens
 Arfrp1ENSMUSG00000038671Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8JHI3 / arl13b / ADP-ribosylation factor-like 13b / Q3SXY8* / Q640N2* / ADP ribosylation factor like GTPase 13B* / ADP-ribosylation factor-like protein 13B *ENSDARG0000001276328
arl13a / ADP-ribosylation factor-like 13A / Q5H913* / Q9D416* / ADP ribosylation factor like GTPase 13A* / ADP-ribosylation factor-like protein 13A *ENSDARG0000005257526


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR024156  Small GTPase superfamily, ARF type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017606 sys1 / Sys1 golgi trafficking protein / Q8N2H4* / Q78S06* / Gm20458* / SYS1-DBNDD2* / SYS1-DBNDD2 readthrough (NMD candidate)* / SYS1 Golgi-localized integral membrane protein homolog (S. c...  / reaction / complex
 ENSDARG00000101680 arl1 / ADP-ribosylation factor-like 1 / P40616* / P61211* / ADP ribosylation factor like GTPase 1* / ADP-ribosylation factor-like protein 1 *  / complex / reaction






 

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